Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NAF1Q96HR8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.94■■□□□ 1.1
NAF1Q96HR8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NAF1Q96HR8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NAF1Q96HR8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NAF1Q96HR8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NAF1Q96HR8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
NAF1Q96HR8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.94■■□□□ 1.1
NAF1Q96HR8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NAF1Q96HR8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.93■■□□□ 1.1
NAF1Q96HR8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NAF1Q96HR8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.93■■□□□ 1.1
NAF1Q96HR8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NAF1Q96HR8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.93■■□□□ 1.1
NAF1Q96HR8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NAF1Q96HR8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NAF1Q96HR8 RNF165-205ENST00000588679 2904 ntBASIC21.92■■□□□ 1.1
NAF1Q96HR8 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.92■■□□□ 1.1
NAF1Q96HR8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.92■■□□□ 1.1
NAF1Q96HR8 CA15P2-201ENST00000611168 834 ntBASIC21.92■■□□□ 1.1
NAF1Q96HR8 AC073130.3-201ENST00000624389 2278 ntBASIC21.92■■□□□ 1.1
NAF1Q96HR8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NAF1Q96HR8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NAF1Q96HR8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NAF1Q96HR8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NAF1Q96HR8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NAF1Q96HR8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NAF1Q96HR8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NAF1Q96HR8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NAF1Q96HR8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.9■■□□□ 1.1
NAF1Q96HR8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NAF1Q96HR8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NAF1Q96HR8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NAF1Q96HR8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NAF1Q96HR8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NAF1Q96HR8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NAF1Q96HR8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NAF1Q96HR8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
NAF1Q96HR8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
NAF1Q96HR8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NAF1Q96HR8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NAF1Q96HR8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NAF1Q96HR8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
NAF1Q96HR8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.89■■□□□ 1.09
NAF1Q96HR8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.89■■□□□ 1.09
NAF1Q96HR8 AC008764.7-201ENST00000593779 1081 ntBASIC21.89■■□□□ 1.09
NAF1Q96HR8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NAF1Q96HR8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.89■■□□□ 1.09
NAF1Q96HR8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.89■■□□□ 1.09
NAF1Q96HR8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.88■■□□□ 1.09
NAF1Q96HR8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NAF1Q96HR8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NAF1Q96HR8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NAF1Q96HR8 AC092667.1-201ENST00000434301 2586 ntBASIC21.88■■□□□ 1.09
NAF1Q96HR8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
NAF1Q96HR8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.88■■□□□ 1.09
NAF1Q96HR8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NAF1Q96HR8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NAF1Q96HR8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
NAF1Q96HR8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NAF1Q96HR8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NAF1Q96HR8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NAF1Q96HR8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.87■■□□□ 1.09
NAF1Q96HR8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.87■■□□□ 1.09
NAF1Q96HR8 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.87■■□□□ 1.09
NAF1Q96HR8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 RASA4CP-201ENST00000424092 1398 ntBASIC21.87■■□□□ 1.09
NAF1Q96HR8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NAF1Q96HR8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NAF1Q96HR8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.86■■□□□ 1.09
NAF1Q96HR8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms