Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM11Q96F44 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM11Q96F44 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIM11Q96F44 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 C11orf96-202ENST00000528572 1834 ntBASIC23.16■■□□□ 1.3
TRIM11Q96F44 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM11Q96F44 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM11Q96F44 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 AC137767.1-201ENST00000602918 1920 ntBASIC23.16■■□□□ 1.3
TRIM11Q96F44 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM11Q96F44 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 AC133637.1-201ENST00000624115 1537 ntBASIC23.15■■□□□ 1.3
TRIM11Q96F44 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TRIM11Q96F44 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIM11Q96F44 AC092171.4-201ENST00000609130 632 ntBASIC23.15■■□□□ 1.3
TRIM11Q96F44 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TRIM11Q96F44 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM11Q96F44 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TRIM11Q96F44 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM11Q96F44 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM11Q96F44 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
TRIM11Q96F44 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
TRIM11Q96F44 AC006455.2-201ENST00000429931 906 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 SRD5A1P1-201ENST00000442297 786 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM11Q96F44 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM11Q96F44 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM11Q96F44 AC099791.2-201ENST00000605725 427 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 pRNA.6-201ENST00000610482 90 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 pRNA.5-201ENST00000612139 90 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 pRNA.11-201ENST00000618423 90 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 pRNA.13-201ENST00000619112 90 ntBASIC23.14■■□□□ 1.29
TRIM11Q96F44 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM11Q96F44 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM11Q96F44 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM11Q96F44 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM11Q96F44 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM11Q96F44 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM11Q96F44 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM11Q96F44 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM11Q96F44 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM11Q96F44 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM11Q96F44 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM11Q96F44 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM11Q96F44 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TRIM11Q96F44 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TRIM11Q96F44 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM11Q96F44 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM11Q96F44 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM11Q96F44 AL356441.2-201ENST00000443009 864 ntBASIC23.11■■□□□ 1.29
TRIM11Q96F44 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM11Q96F44 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM11Q96F44 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM11Q96F44 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM11Q96F44 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.1■■□□□ 1.29
TRIM11Q96F44 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
TRIM11Q96F44 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM11Q96F44 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM11Q96F44 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms