Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHF3Q92576 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PHF3Q92576 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.8■□□□□ 0.76
PHF3Q92576 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF3Q92576 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF3Q92576 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF3Q92576 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF3Q92576 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF3Q92576 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.8■□□□□ 0.76
PHF3Q92576 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PHF3Q92576 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF3Q92576 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.8■□□□□ 0.76
PHF3Q92576 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF3Q92576 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.79■□□□□ 0.76
PHF3Q92576 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.79■□□□□ 0.76
PHF3Q92576 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PHF3Q92576 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.79■□□□□ 0.76
PHF3Q92576 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
PHF3Q92576 AC022517.1-201ENST00000592429 346 ntBASIC19.79■□□□□ 0.76
PHF3Q92576 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF3Q92576 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.79■□□□□ 0.76
PHF3Q92576 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF3Q92576 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.78■□□□□ 0.76
PHF3Q92576 AP005435.1-201ENST00000529293 1178 ntBASIC19.78■□□□□ 0.76
PHF3Q92576 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
PHF3Q92576 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF3Q92576 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PHF3Q92576 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PHF3Q92576 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PHF3Q92576 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.77■□□□□ 0.76
PHF3Q92576 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF3Q92576 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PHF3Q92576 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF3Q92576 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.77■□□□□ 0.76
PHF3Q92576 CCDC92B-201ENST00000575506 885 ntBASIC19.77■□□□□ 0.76
PHF3Q92576 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.77■□□□□ 0.76
PHF3Q92576 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF3Q92576 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PHF3Q92576 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PHF3Q92576 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PHF3Q92576 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
PHF3Q92576 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.76■□□□□ 0.75
PHF3Q92576 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PHF3Q92576 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.76■□□□□ 0.75
PHF3Q92576 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.76■□□□□ 0.75
PHF3Q92576 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PHF3Q92576 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PHF3Q92576 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PHF3Q92576 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.76■□□□□ 0.75
PHF3Q92576 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.76■□□□□ 0.75
PHF3Q92576 AC092437.1-201ENST00000624794 1048 ntBASIC19.76■□□□□ 0.75
PHF3Q92576 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF3Q92576 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.76■□□□□ 0.75
PHF3Q92576 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 RARRES2P11-201ENST00000635158 484 ntBASIC19.75■□□□□ 0.75
PHF3Q92576 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PHF3Q92576 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.75■□□□□ 0.75
PHF3Q92576 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.75■□□□□ 0.75
PHF3Q92576 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF3Q92576 DUX4L4-201ENST00000566884 1269 ntBASIC19.75■□□□□ 0.75
PHF3Q92576 TERF1P2-201ENST00000583350 1212 ntBASIC19.75■□□□□ 0.75
PHF3Q92576 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PHF3Q92576 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHF3Q92576 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHF3Q92576 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF3Q92576 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF3Q92576 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
PHF3Q92576 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms