Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 MIR4767-201ENST00000582827 78 ntBASIC22.16■■□□□ 1.14
PTCD2Q8WV60 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.16■■□□□ 1.14
PTCD2Q8WV60 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 SUDS3P1-201ENST00000505831 966 ntBASIC22.15■■□□□ 1.14
PTCD2Q8WV60 DUX4L19-201ENST00000557448 1267 ntBASIC22.15■■□□□ 1.14
PTCD2Q8WV60 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 MIR3181-201ENST00000578512 73 ntBASIC22.15■■□□□ 1.14
PTCD2Q8WV60 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 LINC01960-201ENST00000563759 1884 ntBASIC22.15■■□□□ 1.14
PTCD2Q8WV60 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.15■■□□□ 1.14
PTCD2Q8WV60 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTCD2Q8WV60 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PTCD2Q8WV60 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTCD2Q8WV60 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PTCD2Q8WV60 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 EP400NL-214ENST00000641289 2402 ntBASIC22.14■■□□□ 1.13
PTCD2Q8WV60 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.14■■□□□ 1.13
PTCD2Q8WV60 AC004687.1-201ENST00000579003 1625 ntBASIC22.13■■□□□ 1.13
PTCD2Q8WV60 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
PTCD2Q8WV60 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 AC092171.4-201ENST00000609130 632 ntBASIC22.12■■□□□ 1.13
PTCD2Q8WV60 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.12■■□□□ 1.13
PTCD2Q8WV60 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.12■■□□□ 1.13
PTCD2Q8WV60 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 AF213884.3-201ENST00000563833 479 ntBASIC22.11■■□□□ 1.13
PTCD2Q8WV60 pRNA.6-201ENST00000610482 90 ntBASIC22.11■■□□□ 1.13
PTCD2Q8WV60 pRNA.5-201ENST00000612139 90 ntBASIC22.11■■□□□ 1.13
PTCD2Q8WV60 pRNA.11-201ENST00000618423 90 ntBASIC22.11■■□□□ 1.13
PTCD2Q8WV60 pRNA.13-201ENST00000619112 90 ntBASIC22.11■■□□□ 1.13
PTCD2Q8WV60 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.11■■□□□ 1.13
PTCD2Q8WV60 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 AC139530.1-201ENST00000575312 1977 ntBASIC22.1■■□□□ 1.13
PTCD2Q8WV60 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 AP001330.3-201ENST00000520123 633 ntBASIC22.1■■□□□ 1.13
PTCD2Q8WV60 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 AC142381.2-201ENST00000566120 298 ntBASIC22.1■■□□□ 1.13
PTCD2Q8WV60 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PTCD2Q8WV60 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCD2Q8WV60 EDA-201ENST00000338901 1233 ntBASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms