Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 AC233992.3-201ENST00000607491 485 ntBASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
NKX2-3Q8TAU0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NKX2-3Q8TAU0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.05■■□□□ 1.76
NKX2-3Q8TAU0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NKX2-3Q8TAU0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
NKX2-3Q8TAU0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 BX842568.3-201ENST00000418104 571 ntBASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 OR2I1P-207ENST00000453522 948 ntBASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
NKX2-3Q8TAU0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NKX2-3Q8TAU0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.01■■□□□ 1.75
NKX2-3Q8TAU0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
NKX2-3Q8TAU0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.01■■□□□ 1.75
NKX2-3Q8TAU0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.01■■□□□ 1.75
NKX2-3Q8TAU0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NKX2-3Q8TAU0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.99■■□□□ 1.75
NKX2-3Q8TAU0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms