Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 IGHV3-19-201ENST00000521488 291 ntBASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDND2Q8NHS1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 EP400NL-214ENST00000641289 2402 ntBASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 AC010525.1-201ENST00000585559 441 ntBASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDND2Q8NHS1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 OR2I1P-207ENST00000453522 948 ntBASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 AL162430.1-201ENST00000480705 870 ntBASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDND2Q8NHS1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDND2Q8NHS1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDND2Q8NHS1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CLDND2Q8NHS1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.52■□□□□ 0.55
CLDND2Q8NHS1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.52■□□□□ 0.55
CLDND2Q8NHS1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDND2Q8NHS1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 AC233723.2-201ENST00000623798 2106 ntBASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms