Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BEST4Q8NFU0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST4Q8NFU0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST4Q8NFU0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST4Q8NFU0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
BEST4Q8NFU0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BEST4Q8NFU0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BEST4Q8NFU0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BEST4Q8NFU0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.83■□□□□ 0.61
BEST4Q8NFU0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST4Q8NFU0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
BEST4Q8NFU0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
BEST4Q8NFU0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST4Q8NFU0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST4Q8NFU0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST4Q8NFU0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST4Q8NFU0 AL157384.1-201ENST00000445995 2473 ntBASIC18.8■□□□□ 0.6
BEST4Q8NFU0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST4Q8NFU0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST4Q8NFU0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.78■□□□□ 0.6
BEST4Q8NFU0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 AL353803.4-201ENST00000565882 1934 ntBASIC18.78■□□□□ 0.6
BEST4Q8NFU0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST4Q8NFU0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms