Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.21■■□□□ 1.95
RTL9Q8NET4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
RTL9Q8NET4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.21■■□□□ 1.95
RTL9Q8NET4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTL9Q8NET4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL9Q8NET4 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.21■■□□□ 1.95
RTL9Q8NET4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
RTL9Q8NET4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
RTL9Q8NET4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RTL9Q8NET4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.2■■□□□ 1.94
RTL9Q8NET4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.2■■□□□ 1.94
RTL9Q8NET4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.2■■□□□ 1.94
RTL9Q8NET4 BX005040.4-201ENST00000637145 1518 ntBASIC27.2■■□□□ 1.94
RTL9Q8NET4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RTL9Q8NET4 ANOS2P-203ENST00000472227 1816 ntBASIC27.2■■□□□ 1.94
RTL9Q8NET4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RTL9Q8NET4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL9Q8NET4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL9Q8NET4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
RTL9Q8NET4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.19■■□□□ 1.94
RTL9Q8NET4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL9Q8NET4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL9Q8NET4 DUSP8P3-201ENST00000399571 1760 ntBASIC27.18■■□□□ 1.94
RTL9Q8NET4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL9Q8NET4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL9Q8NET4 OXCT2P1-201ENST00000447263 1535 ntBASIC27.18■■□□□ 1.94
RTL9Q8NET4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL9Q8NET4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL9Q8NET4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.18■■□□□ 1.94
RTL9Q8NET4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.17■■□□□ 1.94
RTL9Q8NET4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL9Q8NET4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.17■■□□□ 1.94
RTL9Q8NET4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RTL9Q8NET4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.17■■□□□ 1.94
RTL9Q8NET4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL9Q8NET4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL9Q8NET4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL9Q8NET4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RTL9Q8NET4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.16■■□□□ 1.94
RTL9Q8NET4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL9Q8NET4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL9Q8NET4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.15■■□□□ 1.94
RTL9Q8NET4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTL9Q8NET4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTL9Q8NET4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.15■■□□□ 1.94
RTL9Q8NET4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.14■■□□□ 1.94
RTL9Q8NET4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.14■■□□□ 1.94
RTL9Q8NET4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.14■■□□□ 1.94
RTL9Q8NET4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RTL9Q8NET4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RTL9Q8NET4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.14■■□□□ 1.93
RTL9Q8NET4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
RTL9Q8NET4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTL9Q8NET4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
RTL9Q8NET4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTL9Q8NET4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RTL9Q8NET4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTL9Q8NET4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RTL9Q8NET4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RTL9Q8NET4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.12■■□□□ 1.93
RTL9Q8NET4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
RTL9Q8NET4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RTL9Q8NET4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.1■■□□□ 1.93
RTL9Q8NET4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RTL9Q8NET4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.1■■□□□ 1.93
RTL9Q8NET4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTL9Q8NET4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTL9Q8NET4 AC006015.1-201ENST00000429970 570 ntBASIC27.09■■□□□ 1.93
RTL9Q8NET4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTL9Q8NET4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTL9Q8NET4 AP004607.4-201ENST00000530158 1459 ntBASIC27.09■■□□□ 1.93
RTL9Q8NET4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTL9Q8NET4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTL9Q8NET4 HLA-L-209ENST00000420110 1011 ntBASIC27.09■■□□□ 1.93
RTL9Q8NET4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms