Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 AC104187.1-201ENST00000607510 612 ntBASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 AC004687.1-201ENST00000579003 1625 ntBASIC22.93■■□□□ 1.26
SMRP1Q8NCR6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 AC073210.2-201ENST00000430369 194 ntBASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMRP1Q8NCR6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 UBE2DNL-204ENST00000602536 740 ntBASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 AC133041.1-202ENST00000642053 222 ntBASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 KRT87P-202ENST00000534226 1464 ntBASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMRP1Q8NCR6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 AC008687.6-201ENST00000596318 630 ntBASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMRP1Q8NCR6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 AP003733.4-201ENST00000623785 1697 ntBASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
SMRP1Q8NCR6 OXCT2P1-201ENST00000447263 1535 ntBASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.88■■□□□ 1.25
SMRP1Q8NCR6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMRP1Q8NCR6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.86■■□□□ 1.25
SMRP1Q8NCR6 AC005224.4-201ENST00000583262 1652 ntBASIC22.85■■□□□ 1.25
SMRP1Q8NCR6 AF201337.1-201ENST00000520239 748 ntBASIC22.85■■□□□ 1.25
SMRP1Q8NCR6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SMRP1Q8NCR6 MYCNOS-205ENST00000641950 531 ntBASIC22.85■■□□□ 1.25
SMRP1Q8NCR6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
SMRP1Q8NCR6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMRP1Q8NCR6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.84■■□□□ 1.25
SMRP1Q8NCR6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.84■■□□□ 1.25
SMRP1Q8NCR6 AC098934.4-201ENST00000564127 592 ntBASIC22.84■■□□□ 1.25
SMRP1Q8NCR6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms