Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.13■■□□□ 1.29
TTC9BQ8N6N2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 AC010141.3-201ENST00000456659 717 ntBASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 AC092437.1-201ENST00000624794 1048 ntBASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC9BQ8N6N2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC9BQ8N6N2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 KRT18P61-201ENST00000585825 1298 ntBASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 SMUG1P1-201ENST00000590640 811 ntBASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 TPRG1LP1-201ENST00000598702 760 ntBASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 AC068587.7-201ENST00000641602 218 ntBASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC9BQ8N6N2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 NTF6G-201ENST00000591094 616 ntBASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC9BQ8N6N2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC9BQ8N6N2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TTC9BQ8N6N2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TTC9BQ8N6N2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.08■■□□□ 1.28
TTC9BQ8N6N2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 AC087239.1-201ENST00000622671 572 ntBASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TTC9BQ8N6N2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.06■■□□□ 1.28
TTC9BQ8N6N2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 OXCT2P1-201ENST00000447263 1535 ntBASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.05■■□□□ 1.28
TTC9BQ8N6N2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.04■■□□□ 1.28
TTC9BQ8N6N2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms