Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
VPS8Q8N3P4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
VPS8Q8N3P4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC34.55■■■■□ 3.12
VPS8Q8N3P4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC34.55■■■■□ 3.12
VPS8Q8N3P4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.55■■■■□ 3.12
VPS8Q8N3P4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
VPS8Q8N3P4 YBX1P1-201ENST00000445822 960 ntBASIC34.55■■■■□ 3.12
VPS8Q8N3P4 AC087239.1-201ENST00000622671 572 ntBASIC34.55■■■■□ 3.12
VPS8Q8N3P4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
VPS8Q8N3P4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
VPS8Q8N3P4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC34.54■■■■□ 3.12
VPS8Q8N3P4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
VPS8Q8N3P4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
VPS8Q8N3P4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC34.52■■■■□ 3.12
VPS8Q8N3P4 AC087623.3-201ENST00000607047 1098 ntBASIC34.52■■■■□ 3.12
VPS8Q8N3P4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
VPS8Q8N3P4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 NME4-202ENST00000382940 766 ntTSL 3 BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC34.51■■■■□ 3.12
VPS8Q8N3P4 AC105233.4-201ENST00000642045 216 ntBASIC34.51■■■■□ 3.12
VPS8Q8N3P4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
VPS8Q8N3P4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
VPS8Q8N3P4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.11
VPS8Q8N3P4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
VPS8Q8N3P4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC34.5■■■■□ 3.11
VPS8Q8N3P4 SMUG1P1-201ENST00000590640 811 ntBASIC34.5■■■■□ 3.11
VPS8Q8N3P4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
VPS8Q8N3P4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC34.49■■■■□ 3.11
VPS8Q8N3P4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC34.49■■■■□ 3.11
VPS8Q8N3P4 TPRG1LP1-201ENST00000598702 760 ntBASIC34.49■■■■□ 3.11
VPS8Q8N3P4 AC087742.1-201ENST00000575880 1738 ntBASIC34.49■■■■□ 3.11
VPS8Q8N3P4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC34.49■■■■□ 3.11
VPS8Q8N3P4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
VPS8Q8N3P4 OXCT2P1-201ENST00000447263 1535 ntBASIC34.49■■■■□ 3.11
VPS8Q8N3P4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC34.49■■■■□ 3.11
VPS8Q8N3P4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC34.48■■■■□ 3.11
VPS8Q8N3P4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
VPS8Q8N3P4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
VPS8Q8N3P4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC34.48■■■■□ 3.11
VPS8Q8N3P4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC34.48■■■■□ 3.11
VPS8Q8N3P4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
VPS8Q8N3P4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
VPS8Q8N3P4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC34.47■■■■□ 3.11
VPS8Q8N3P4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC34.47■■■■□ 3.11
VPS8Q8N3P4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC34.47■■■■□ 3.11
VPS8Q8N3P4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC34.47■■■■□ 3.11
VPS8Q8N3P4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC34.47■■■■□ 3.11
VPS8Q8N3P4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC34.46■■■■□ 3.11
VPS8Q8N3P4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC34.45■■■■□ 3.11
VPS8Q8N3P4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
VPS8Q8N3P4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
VPS8Q8N3P4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
VPS8Q8N3P4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
VPS8Q8N3P4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
VPS8Q8N3P4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
VPS8Q8N3P4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 AC123595.1-201ENST00000440769 1046 ntBASIC34.43■■■■□ 3.1
VPS8Q8N3P4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
VPS8Q8N3P4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
VPS8Q8N3P4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
VPS8Q8N3P4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC34.41■■■■□ 3.1
VPS8Q8N3P4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC34.41■■■■□ 3.1
VPS8Q8N3P4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms