Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.52■■□□□ 1.2
SIX5Q8N196 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
SIX5Q8N196 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SIX5Q8N196 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIX5Q8N196 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.51■■□□□ 1.19
SIX5Q8N196 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIX5Q8N196 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.51■■□□□ 1.19
SIX5Q8N196 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.51■■□□□ 1.19
SIX5Q8N196 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.51■■□□□ 1.19
SIX5Q8N196 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIX5Q8N196 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.5■■□□□ 1.19
SIX5Q8N196 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIX5Q8N196 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SIX5Q8N196 FAM201B-201ENST00000458407 597 ntBASIC22.5■■□□□ 1.19
SIX5Q8N196 AL138781.1-201ENST00000566567 1274 ntBASIC22.5■■□□□ 1.19
SIX5Q8N196 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIX5Q8N196 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SIX5Q8N196 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.49■■□□□ 1.19
SIX5Q8N196 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SIX5Q8N196 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.49■■□□□ 1.19
SIX5Q8N196 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.49■■□□□ 1.19
SIX5Q8N196 SMUG1P1-201ENST00000590640 811 ntBASIC22.49■■□□□ 1.19
SIX5Q8N196 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.49■■□□□ 1.19
SIX5Q8N196 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SIX5Q8N196 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.49■■□□□ 1.19
SIX5Q8N196 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIX5Q8N196 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SIX5Q8N196 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.48■■□□□ 1.19
SIX5Q8N196 GUSBP6-202ENST00000438529 1198 ntBASIC22.48■■□□□ 1.19
SIX5Q8N196 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SIX5Q8N196 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.48■■□□□ 1.19
SIX5Q8N196 AC093827.2-201ENST00000512654 315 ntBASIC22.48■■□□□ 1.19
SIX5Q8N196 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.48■■□□□ 1.19
SIX5Q8N196 SLC7A5P2-201ENST00000553010 536 ntBASIC22.48■■□□□ 1.19
SIX5Q8N196 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.48■■□□□ 1.19
SIX5Q8N196 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.47■■□□□ 1.19
SIX5Q8N196 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIX5Q8N196 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIX5Q8N196 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SIX5Q8N196 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIX5Q8N196 SLC29A4P1-201ENST00000398760 971 ntBASIC22.47■■□□□ 1.19
SIX5Q8N196 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SIX5Q8N196 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.47■■□□□ 1.19
SIX5Q8N196 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.47■■□□□ 1.19
SIX5Q8N196 AC005181.1-201ENST00000604782 1256 ntBASIC22.47■■□□□ 1.19
SIX5Q8N196 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.47■■□□□ 1.19
SIX5Q8N196 AC231657.2-201ENST00000624556 255 ntBASIC22.47■■□□□ 1.19
SIX5Q8N196 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.47■■□□□ 1.19
SIX5Q8N196 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.47■■□□□ 1.19
SIX5Q8N196 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.47■■□□□ 1.19
SIX5Q8N196 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SIX5Q8N196 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SIX5Q8N196 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SIX5Q8N196 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIX5Q8N196 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SIX5Q8N196 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SIX5Q8N196 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.46■■□□□ 1.19
SIX5Q8N196 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.46■■□□□ 1.19
SIX5Q8N196 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.46■■□□□ 1.19
SIX5Q8N196 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.46■■□□□ 1.19
SIX5Q8N196 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.46■■□□□ 1.19
SIX5Q8N196 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
SIX5Q8N196 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIX5Q8N196 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.46■■□□□ 1.19
SIX5Q8N196 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
SIX5Q8N196 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SIX5Q8N196 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SIX5Q8N196 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.45■■□□□ 1.18
SIX5Q8N196 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SIX5Q8N196 AC007322.1-201ENST00000426983 750 ntBASIC22.45■■□□□ 1.18
SIX5Q8N196 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SIX5Q8N196 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.45■■□□□ 1.18
SIX5Q8N196 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.45■■□□□ 1.18
SIX5Q8N196 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SIX5Q8N196 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SIX5Q8N196 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.44■■□□□ 1.18
SIX5Q8N196 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SIX5Q8N196 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.44■■□□□ 1.18
SIX5Q8N196 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms