Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.13■■□□□ 1.29
SYCE1Q8N0S2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYCE1Q8N0S2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.13■■□□□ 1.29
SYCE1Q8N0S2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.13■■□□□ 1.29
SYCE1Q8N0S2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYCE1Q8N0S2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.13■■□□□ 1.29
SYCE1Q8N0S2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.12■■□□□ 1.29
SYCE1Q8N0S2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SYCE1Q8N0S2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SYCE1Q8N0S2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SYCE1Q8N0S2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.12■■□□□ 1.29
SYCE1Q8N0S2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SYCE1Q8N0S2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.11■■□□□ 1.29
SYCE1Q8N0S2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 CA15P2-201ENST00000611168 834 ntBASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYCE1Q8N0S2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 AC004687.1-201ENST00000579003 1625 ntBASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 AC009102.2-201ENST00000606772 1639 ntBASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 AL137060.1-201ENST00000618151 2648 ntBASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SYCE1Q8N0S2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 AC010542.4-201ENST00000563151 1910 ntBASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 AC092028.1-203ENST00000608262 953 ntBASIC23.08■■□□□ 1.29
SYCE1Q8N0S2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SYCE1Q8N0S2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SYCE1Q8N0S2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.08■■□□□ 1.28
SYCE1Q8N0S2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SYCE1Q8N0S2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
SYCE1Q8N0S2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 FAM99A-202ENST00000538190 1989 ntBASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SYCE1Q8N0S2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms