Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 GUSBP6-202ENST00000438529 1198 ntBASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.96■□□□□ 0.95
COL27A1Q8IZC6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 AC010141.3-201ENST00000456659 717 ntBASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.95■□□□□ 0.94
COL27A1Q8IZC6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 SLC7A5P2-201ENST00000553010 536 ntBASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 AL109923.1-201ENST00000618799 583 ntBASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.94■□□□□ 0.94
COL27A1Q8IZC6 AC004812.2-201ENST00000611079 2094 ntBASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 AC005224.4-201ENST00000583262 1652 ntBASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL27A1Q8IZC6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 AC006970.2-201ENST00000450065 779 ntBASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL27A1Q8IZC6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 UBE2DNL-204ENST00000602536 740 ntBASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 AC104187.1-201ENST00000607510 612 ntBASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.91■□□□□ 0.94
COL27A1Q8IZC6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 KRT18P11-201ENST00000435214 1283 ntBASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 DUX4L16-201ENST00000555130 1264 ntBASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 KRT87P-202ENST00000534226 1464 ntBASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL27A1Q8IZC6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL27A1Q8IZC6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL27A1Q8IZC6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL27A1Q8IZC6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL27A1Q8IZC6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL27A1Q8IZC6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.89■□□□□ 0.93
COL27A1Q8IZC6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.89■□□□□ 0.93
COL27A1Q8IZC6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL27A1Q8IZC6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL27A1Q8IZC6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms