Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CPNE9Q8IYJ1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.64■■□□□ 1.06
CPNE9Q8IYJ1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 AC080038.3-201ENST00000623346 1952 ntBASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 AC133637.1-201ENST00000624115 1537 ntBASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 AC242852.2-201ENST00000615738 1807 ntBASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE9Q8IYJ1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE9Q8IYJ1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 MIR3181-201ENST00000578512 73 ntBASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 LINC00526-201ENST00000581067 1875 ntBASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE9Q8IYJ1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 AL024507.2-201ENST00000606070 2574 ntBASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE9Q8IYJ1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.6■■□□□ 1.05
CPNE9Q8IYJ1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 AC092171.4-201ENST00000609130 632 ntBASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 AC131212.1-201ENST00000613771 668 ntBASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE9Q8IYJ1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms