Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC146Q8IYE0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 AL031602.1-201ENST00000633169 911 ntBASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC146Q8IYE0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
CCDC146Q8IYE0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CCDC146Q8IYE0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CCDC146Q8IYE0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CCDC146Q8IYE0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.07■■■□□ 2.24
CCDC146Q8IYE0 AC142381.2-201ENST00000566120 298 ntBASIC29.07■■■□□ 2.24
CCDC146Q8IYE0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
CCDC146Q8IYE0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC29.06■■■□□ 2.24
CCDC146Q8IYE0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.06■■■□□ 2.24
CCDC146Q8IYE0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CCDC146Q8IYE0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CCDC146Q8IYE0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
CCDC146Q8IYE0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CCDC146Q8IYE0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CCDC146Q8IYE0 AC233723.2-201ENST00000623798 2106 ntBASIC29.05■■■□□ 2.24
CCDC146Q8IYE0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.05■■■□□ 2.24
CCDC146Q8IYE0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CCDC146Q8IYE0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CCDC146Q8IYE0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 AC027682.1-201ENST00000562846 899 ntBASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.04■■■□□ 2.24
CCDC146Q8IYE0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 CA15P2-201ENST00000611168 834 ntBASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
CCDC146Q8IYE0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 AC126544.1-201ENST00000580842 1059 ntBASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
CCDC146Q8IYE0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 AC080038.3-201ENST00000623346 1952 ntBASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC146Q8IYE0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
CCDC146Q8IYE0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC29■■■□□ 2.23
CCDC146Q8IYE0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
CCDC146Q8IYE0 GRAMD4P2-201ENST00000423297 1097 ntBASIC29■■■□□ 2.23
CCDC146Q8IYE0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29■■■□□ 2.23
CCDC146Q8IYE0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29■■■□□ 2.23
CCDC146Q8IYE0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29■■■□□ 2.23
CCDC146Q8IYE0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CCDC146Q8IYE0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CCDC146Q8IYE0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 AC091305.1-201ENST00000479476 895 ntBASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.99■■■□□ 2.23
CCDC146Q8IYE0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms