Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.8■■□□□ 1.08
CRLF3Q8IUI8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRLF3Q8IUI8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 AL356441.2-201ENST00000443009 864 ntBASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CRLF3Q8IUI8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 AC131212.1-201ENST00000613771 668 ntBASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CRLF3Q8IUI8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.77■■□□□ 1.07
CRLF3Q8IUI8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.77■■□□□ 1.07
CRLF3Q8IUI8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF3Q8IUI8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 AC021242.3-201ENST00000607598 1377 ntBASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF3Q8IUI8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRLF3Q8IUI8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 AC026310.3-201ENST00000625186 2373 ntBASIC21.73■■□□□ 1.07
CRLF3Q8IUI8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 AC004448.1-201ENST00000458332 883 ntBASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 UNC93B8-201ENST00000511903 705 ntBASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CRLF3Q8IUI8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms