Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 SNX5-217ENST00000606557 1087 ntBASIC22.54■■□□□ 1.2
CCDC25Q86WR0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC25Q86WR0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC25Q86WR0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 AC026310.3-201ENST00000625186 2373 ntBASIC22.52■■□□□ 1.2
CCDC25Q86WR0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.52■■□□□ 1.2
CCDC25Q86WR0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CCDC25Q86WR0 FAM99A-202ENST00000538190 1989 ntBASIC22.51■■□□□ 1.19
CCDC25Q86WR0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC25Q86WR0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC25Q86WR0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC25Q86WR0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC25Q86WR0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC25Q86WR0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 LINC01529-204ENST00000636474 1715 ntBASIC22.5■■□□□ 1.19
CCDC25Q86WR0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC25Q86WR0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 AC010542.4-201ENST00000563151 1910 ntBASIC22.49■■□□□ 1.19
CCDC25Q86WR0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 LINC01960-201ENST00000563759 1884 ntBASIC22.49■■□□□ 1.19
CCDC25Q86WR0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CCDC25Q86WR0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC25Q86WR0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms