Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 AF201337.1-201ENST00000520239 748 ntBASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.86■■□□□ 1.09
SDK1Q7Z5N4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 AC083906.2-201ENST00000511578 360 ntBASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.85■■□□□ 1.09
SDK1Q7Z5N4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 AC087239.1-201ENST00000622671 572 ntBASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.84■■□□□ 1.09
SDK1Q7Z5N4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 GUSBP6-202ENST00000438529 1198 ntBASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.83■■□□□ 1.09
SDK1Q7Z5N4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.83■■□□□ 1.08
SDK1Q7Z5N4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SDK1Q7Z5N4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.83■■□□□ 1.08
SDK1Q7Z5N4 CNN2P6-201ENST00000439038 900 ntBASIC21.83■■□□□ 1.08
SDK1Q7Z5N4 AL138781.1-201ENST00000566567 1274 ntBASIC21.83■■□□□ 1.08
SDK1Q7Z5N4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SDK1Q7Z5N4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 AC069152.1-201ENST00000438030 544 ntBASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 AC145676.1-201ENST00000514988 2004 ntBASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 KRT18P6-201ENST00000555540 1265 ntBASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.82■■□□□ 1.08
SDK1Q7Z5N4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDK1Q7Z5N4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.81■■□□□ 1.08
SDK1Q7Z5N4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SDK1Q7Z5N4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SDK1Q7Z5N4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDK1Q7Z5N4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SDK1Q7Z5N4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDK1Q7Z5N4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDK1Q7Z5N4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 SLC7A5P2-201ENST00000553010 536 ntBASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 AC098934.4-201ENST00000564127 592 ntBASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 AC079630.1-202ENST00000618127 1840 ntBASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SDK1Q7Z5N4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms