Protein–RNA interactions for Protein: Q7Z2R9

SSBP3-AS1, Putative uncharacterized protein SSBP3-AS1, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-AS1Q7Z2R9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 DUX4L19-201ENST00000557448 1267 ntBASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3-AS1Q7Z2R9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AC068587.7-201ENST00000641602 218 ntBASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AC004687.1-201ENST00000579003 1625 ntBASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP3-AS1Q7Z2R9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 LINC01960-201ENST00000563759 1884 ntBASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AL356441.2-201ENST00000443009 864 ntBASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3-AS1Q7Z2R9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AC099791.2-201ENST00000605725 427 ntBASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 pRNA.6-201ENST00000610482 90 ntBASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 pRNA.5-201ENST00000612139 90 ntBASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 pRNA.11-201ENST00000618423 90 ntBASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 pRNA.13-201ENST00000619112 90 ntBASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC12.92□□□□□ -0.34
SSBP3-AS1Q7Z2R9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 AC087742.1-201ENST00000575880 1738 ntBASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3-AS1Q7Z2R9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms