Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 AC123595.1-201ENST00000440769 1046 ntBASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NIPA1Q7RTP0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
NIPA1Q7RTP0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NIPA1Q7RTP0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NIPA1Q7RTP0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NIPA1Q7RTP0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.68■■□□□ 1.54
NIPA1Q7RTP0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NIPA1Q7RTP0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.67■■□□□ 1.54
NIPA1Q7RTP0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 SMUG1P1-201ENST00000590640 811 ntBASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 MIR6084-201ENST00000622012 110 ntBASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.66■■□□□ 1.54
NIPA1Q7RTP0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 AC087623.3-201ENST00000607047 1098 ntBASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 MIR5787-201ENST00000611784 55 ntBASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
NIPA1Q7RTP0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.64■■□□□ 1.54
NIPA1Q7RTP0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.64■■□□□ 1.53
NIPA1Q7RTP0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
NIPA1Q7RTP0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NIPA1Q7RTP0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPA1Q7RTP0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.63■■□□□ 1.53
NIPA1Q7RTP0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPA1Q7RTP0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPA1Q7RTP0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPA1Q7RTP0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.62■■□□□ 1.53
NIPA1Q7RTP0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 AC079089.2-201ENST00000531211 1277 ntBASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPA1Q7RTP0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NIPA1Q7RTP0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms