Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF44Q7L0R7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF44Q7L0R7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF44Q7L0R7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF44Q7L0R7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 LINC01960-201ENST00000563759 1884 ntBASIC20.94■□□□□ 0.94
RNF44Q7L0R7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF44Q7L0R7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 AC087239.1-201ENST00000622671 572 ntBASIC20.93■□□□□ 0.94
RNF44Q7L0R7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF44Q7L0R7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 IRS3P-201ENST00000223076 1006 ntBASIC20.92■□□□□ 0.94
RNF44Q7L0R7 AC010141.3-201ENST00000456659 717 ntBASIC20.92■□□□□ 0.94
RNF44Q7L0R7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF44Q7L0R7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 MIR572-201ENST00000384983 95 ntBASIC20.91■□□□□ 0.94
RNF44Q7L0R7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF44Q7L0R7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms