Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PDSS1Q5T2R2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDSS1Q5T2R2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDSS1Q5T2R2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 DUSP8P3-201ENST00000399571 1760 ntBASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 AP001330.3-201ENST00000520123 633 ntBASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 RASA4CP-201ENST00000424092 1398 ntBASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.81■□□□□ 0.76
PDSS1Q5T2R2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 MIR939-201ENST00000401314 82 ntBASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 SUDS3P1-201ENST00000505831 966 ntBASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 AC126544.1-201ENST00000580842 1059 ntBASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 AC068587.7-201ENST00000641602 218 ntBASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDSS1Q5T2R2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AC099791.1-201ENST00000416440 715 ntBASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AL031432.3-201ENST00000607698 485 ntBASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AL136967.2-201ENST00000623968 743 ntBASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AL024507.2-201ENST00000606070 2574 ntBASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDSS1Q5T2R2 AC019069.1-201ENST00000610008 1333 ntBASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDSS1Q5T2R2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 CA15P2-201ENST00000611168 834 ntBASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 AC087239.1-201ENST00000622671 572 ntBASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PDSS1Q5T2R2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDSS1Q5T2R2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.77■□□□□ 0.75
PDSS1Q5T2R2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDSS1Q5T2R2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDSS1Q5T2R2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDSS1Q5T2R2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDSS1Q5T2R2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDSS1Q5T2R2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDSS1Q5T2R2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDSS1Q5T2R2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms