Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTCAP3Q53RY4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 AL139125.2-201ENST00000623134 1869 ntBASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 AC004812.2-201ENST00000611079 2094 ntBASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRTCAP3Q53RY4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
KRTCAP3Q53RY4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.69■□□□□ 0.74
KRTCAP3Q53RY4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRTCAP3Q53RY4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRTCAP3Q53RY4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KRTCAP3Q53RY4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.69■□□□□ 0.74
KRTCAP3Q53RY4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KRTCAP3Q53RY4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 KRT18P11-201ENST00000435214 1283 ntBASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 AC004854.2-201ENST00000608450 1441 ntBASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTCAP3Q53RY4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 KRT18P61-201ENST00000585825 1298 ntBASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.66■□□□□ 0.74
KRTCAP3Q53RY4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTCAP3Q53RY4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms