Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.33■■□□□ 1
CCSMST1Q4G0I0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CCSMST1Q4G0I0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.33■■□□□ 1
CCSMST1Q4G0I0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CCSMST1Q4G0I0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCSMST1Q4G0I0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
CCSMST1Q4G0I0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 AP001330.3-201ENST00000520123 633 ntBASIC21.32■■□□□ 1
CCSMST1Q4G0I0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 AC008764.7-201ENST00000593779 1081 ntBASIC21.32■■□□□ 1
CCSMST1Q4G0I0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCSMST1Q4G0I0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 BX842568.3-201ENST00000418104 571 ntBASIC21.31■■□□□ 1
CCSMST1Q4G0I0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCSMST1Q4G0I0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 EDA-201ENST00000338901 1233 ntBASIC21.3■■□□□ 1
CCSMST1Q4G0I0 MIR638-201ENST00000385237 100 ntBASIC21.3■■□□□ 1
CCSMST1Q4G0I0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 AF213884.3-201ENST00000563833 479 ntBASIC21.3■■□□□ 1
CCSMST1Q4G0I0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCSMST1Q4G0I0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 AC080038.3-201ENST00000623346 1952 ntBASIC21.29■■□□□ 1
CCSMST1Q4G0I0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 SUDS3P1-201ENST00000505831 966 ntBASIC21.29■■□□□ 1
CCSMST1Q4G0I0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 AC233992.3-201ENST00000607491 485 ntBASIC21.29■■□□□ 1
CCSMST1Q4G0I0 AL355001.2-201ENST00000620617 1191 ntBASIC21.29■■□□□ 1
CCSMST1Q4G0I0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCSMST1Q4G0I0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 AC099791.1-201ENST00000416440 715 ntBASIC21.28■■□□□ 1
CCSMST1Q4G0I0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 AL136967.2-201ENST00000623968 743 ntBASIC21.28■■□□□ 1
CCSMST1Q4G0I0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.28■■□□□ 1
CCSMST1Q4G0I0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSMST1Q4G0I0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 MIR939-201ENST00000401314 82 ntBASIC21.27■■□□□ 1
CCSMST1Q4G0I0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 AC133561.4-201ENST00000566112 224 ntBASIC21.27■■□□□ 1
CCSMST1Q4G0I0 AC005837.3-201ENST00000612163 286 ntBASIC21.27■■□□□ 1
CCSMST1Q4G0I0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCSMST1Q4G0I0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.27■□□□□ 0.99
CCSMST1Q4G0I0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CCSMST1Q4G0I0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CCSMST1Q4G0I0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCSMST1Q4G0I0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CCSMST1Q4G0I0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSMST1Q4G0I0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms