Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDS5AQ29RF7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 BX005040.4-201ENST00000637145 1518 ntBASIC26.49■■□□□ 1.83
PDS5AQ29RF7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 AC093323.1-202ENST00000635031 2045 ntBASIC26.49■■□□□ 1.83
PDS5AQ29RF7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.49■■□□□ 1.83
PDS5AQ29RF7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDS5AQ29RF7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDS5AQ29RF7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDS5AQ29RF7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDS5AQ29RF7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDS5AQ29RF7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.46■■□□□ 1.83
PDS5AQ29RF7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDS5AQ29RF7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.46■■□□□ 1.83
PDS5AQ29RF7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDS5AQ29RF7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.46■■□□□ 1.83
PDS5AQ29RF7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDS5AQ29RF7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
PDS5AQ29RF7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PDS5AQ29RF7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.45■■□□□ 1.83
PDS5AQ29RF7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.45■■□□□ 1.83
PDS5AQ29RF7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.45■■□□□ 1.82
PDS5AQ29RF7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDS5AQ29RF7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
PDS5AQ29RF7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
PDS5AQ29RF7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDS5AQ29RF7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDS5AQ29RF7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.44■■□□□ 1.82
PDS5AQ29RF7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDS5AQ29RF7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDS5AQ29RF7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDS5AQ29RF7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
PDS5AQ29RF7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PDS5AQ29RF7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 AC022517.1-201ENST00000592429 346 ntBASIC26.43■■□□□ 1.82
PDS5AQ29RF7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.43■■□□□ 1.82
PDS5AQ29RF7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDS5AQ29RF7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
PDS5AQ29RF7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.42■■□□□ 1.82
PDS5AQ29RF7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDS5AQ29RF7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDS5AQ29RF7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 NTF6G-201ENST00000591094 616 ntBASIC26.41■■□□□ 1.82
PDS5AQ29RF7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDS5AQ29RF7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDS5AQ29RF7 LINC01960-201ENST00000563759 1884 ntBASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms