Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 OM14YBR230C 405 nt3.1□□□□□ -1.91
VPS13Q07878 SEA4YBL104C 3117 nt3.1□□□□□ -1.91
VPS13Q07878 RSM10YDR041W 612 nt3.1□□□□□ -1.91
VPS13Q07878 YGR122WYGR122W 1209 nt3.1□□□□□ -1.91
VPS13Q07878 GRE3YHR104W 984 nt3.1□□□□□ -1.91
VPS13Q07878 WSS1YHR134W 810 nt3.1□□□□□ -1.91
VPS13Q07878 YLR255CYLR255C 354 nt3.1□□□□□ -1.91
VPS13Q07878 ASI1YMR119W 1875 nt3.1□□□□□ -1.91
VPS13Q07878 YPR050CYPR050C 414 nt3.09□□□□□ -1.91
VPS13Q07878 YOL153CYOL153C 1746 nt3.09□□□□□ -1.91
VPS13Q07878 YHL049CYHL049C 816 nt3.09□□□□□ -1.92
VPS13Q07878 SAM37YMR060C 984 nt3.09□□□□□ -1.92
VPS13Q07878 PEX32YBR168W 1242 nt3.09□□□□□ -1.92
VPS13Q07878 SAC1YKL212W 1872 nt3.09□□□□□ -1.92
VPS13Q07878 SNU66YOR308C 1764 nt3.09□□□□□ -1.92
VPS13Q07878 SMF1YOL122C 1728 nt3.09□□□□□ -1.92
VPS13Q07878 UBP5YER144C 2418 nt3.08□□□□□ -1.92
VPS13Q07878 ECM22YLR228C 2445 nt3.08□□□□□ -1.92
VPS13Q07878 YOR296WYOR296W 3870 nt3.08□□□□□ -1.92
VPS13Q07878 SEC53YFL045C 765 nt3.08□□□□□ -1.92
VPS13Q07878 YIL077CYIL077C 963 nt3.08□□□□□ -1.92
VPS13Q07878 PBA1YLR199C 831 nt3.08□□□□□ -1.92
VPS13Q07878 SSQ1YLR369W 1974 nt3.07□□□□□ -1.92
VPS13Q07878 YJR085CYJR085C 318 nt3.07□□□□□ -1.92
VPS13Q07878 ILS1YBL076C 3219 nt3.07□□□□□ -1.92
VPS13Q07878 TOR1YJR066W 7413 nt3.07□□□□□ -1.92
VPS13Q07878 FLO9YAL063C 3969 nt3.06□□□□□ -1.92
VPS13Q07878 RBL2YOR265W 321 nt3.06□□□□□ -1.92
VPS13Q07878 STE11YLR362W 2154 nt3.06□□□□□ -1.92
VPS13Q07878 HSH155YMR288W 2916 nt3.06□□□□□ -1.92
VPS13Q07878 PEF1YGR058W 1008 nt3.06□□□□□ -1.92
VPS13Q07878 YAL004WYAL004W 648 nt3.06□□□□□ -1.92
VPS13Q07878 URK1YNR012W 1506 nt3.06□□□□□ -1.92
VPS13Q07878 PFK26YIL107C 2484 nt3.06□□□□□ -1.92
VPS13Q07878 VID28YIL017C 2766 nt3.06□□□□□ -1.92
VPS13Q07878 HCM1YCR065W 1695 nt3.05□□□□□ -1.92
VPS13Q07878 YDL241WYDL241W 372 nt3.05□□□□□ -1.92
VPS13Q07878 RPL30YGL030W 318 nt3.05□□□□□ -1.92
VPS13Q07878 NOP2YNL061W 1857 nt3.05□□□□□ -1.92
VPS13Q07878 tW(CCA)G1tW(CCA)G1 72 nt3.05□□□□□ -1.92
VPS13Q07878 tW(CCA)G2tW(CCA)G2 72 nt3.05□□□□□ -1.92
VPS13Q07878 tW(CCA)JtW(CCA)J 72 nt3.05□□□□□ -1.92
VPS13Q07878 tW(CCA)KtW(CCA)K 72 nt3.05□□□□□ -1.92
VPS13Q07878 tW(CCA)MtW(CCA)M 72 nt3.05□□□□□ -1.92
VPS13Q07878 tW(CCA)PtW(CCA)P 72 nt3.05□□□□□ -1.92
VPS13Q07878 TEF4YKL081W 1239 nt3.05□□□□□ -1.92
VPS13Q07878 SIC1YLR079W 855 nt3.05□□□□□ -1.92
VPS13Q07878 DGA1YOR245C 1257 nt3.05□□□□□ -1.92
VPS13Q07878 PRX1YBL064C 786 nt3.04□□□□□ -1.92
VPS13Q07878 SLM5YCR024C 1479 nt3.04□□□□□ -1.92
VPS13Q07878 SNF3YDL194W 2655 nt3.04□□□□□ -1.92
VPS13Q07878 EIS1YMR031C 2532 nt3.03□□□□□ -1.92
VPS13Q07878 VTC3YPL019C 2508 nt3.03□□□□□ -1.92
VPS13Q07878 PHM6YDR281C 315 nt3.03□□□□□ -1.92
VPS13Q07878 YKR033CYKR033C 426 nt3.03□□□□□ -1.92
VPS13Q07878 PEX18YHR160C 852 nt3.03□□□□□ -1.92
VPS13Q07878 MIC27YNL100W 705 nt3.03□□□□□ -1.92
VPS13Q07878 YDL176WYDL176W 2127 nt3.03□□□□□ -1.93
VPS13Q07878 PSY1YKL076C 384 nt3.02□□□□□ -1.93
VPS13Q07878 TYR1YBR166C 1359 nt3.02□□□□□ -1.93
VPS13Q07878 MAL12YGR292W 1755 nt3.02□□□□□ -1.93
VPS13Q07878 YJR030CYJR030C 2238 nt3.02□□□□□ -1.93
VPS13Q07878 YLR177WYLR177W 1887 nt3.02□□□□□ -1.93
VPS13Q07878 YOR277CYOR277C 309 nt3.02□□□□□ -1.93
VPS13Q07878 LEU1YGL009C 2340 nt3.01□□□□□ -1.93
VPS13Q07878 TAF7YMR227C 1773 nt3.01□□□□□ -1.93
VPS13Q07878 MDY2YOL111C 639 nt3.01□□□□□ -1.93
VPS13Q07878 YNL247WYNL247W 2304 nt3.01□□□□□ -1.93
VPS13Q07878 NTO1YPR031W 2247 nt3.01□□□□□ -1.93
VPS13Q07878 MNL1YHR204W 2391 nt3.01□□□□□ -1.93
VPS13Q07878 YMR187CYMR187C 1296 nt3.01□□□□□ -1.93
VPS13Q07878 KTI11YBL071W-A 249 nt3.01□□□□□ -1.93
VPS13Q07878 ASN1YPR145W 1719 nt3□□□□□ -1.93
VPS13Q07878 SOP4YJL192C 705 nt3□□□□□ -1.93
VPS13Q07878 EMC6YLL014W 327 nt3□□□□□ -1.93
VPS13Q07878 FAP7YDL166C 594 nt2.99□□□□□ -1.93
VPS13Q07878 LNP1YHR192W 837 nt2.99□□□□□ -1.93
VPS13Q07878 SKI6YGR195W 741 nt2.99□□□□□ -1.93
VPS13Q07878 WRS1YOL097C 1299 nt2.99□□□□□ -1.93
VPS13Q07878 HOF1YMR032W 2010 nt2.99□□□□□ -1.93
VPS13Q07878 RMT2YDR465C 1239 nt2.99□□□□□ -1.93
VPS13Q07878 ENA2YDR039C 3276 nt2.99□□□□□ -1.93
VPS13Q07878 ENA1YDR040C 3276 nt2.99□□□□□ -1.93
VPS13Q07878 NEW1YPL226W 3591 nt2.98□□□□□ -1.93
VPS13Q07878 DDC1YPL194W 1839 nt2.98□□□□□ -1.93
VPS13Q07878 FKH2YNL068C 2589 nt2.98□□□□□ -1.93
VPS13Q07878 TIF4632YGL049C 2745 nt2.98□□□□□ -1.93
VPS13Q07878 ATP7YKL016C 525 nt2.98□□□□□ -1.93
VPS13Q07878 KAR4YCL055W 1008 nt2.98□□□□□ -1.93
VPS13Q07878 SMA2YML066C 1110 nt2.98□□□□□ -1.93
VPS13Q07878 NRM1YNR009W 750 nt2.98□□□□□ -1.93
VPS13Q07878 HAP1YLR256W 4509 nt2.98□□□□□ -1.93
VPS13Q07878 RGC1YPR115W 3252 nt2.97□□□□□ -1.93
VPS13Q07878 EMW1YNL313C 2715 nt2.97□□□□□ -1.93
VPS13Q07878 STV1YMR054W 2673 nt2.97□□□□□ -1.93
VPS13Q07878 PHD1YKL043W 1101 nt2.97□□□□□ -1.93
VPS13Q07878 ARP1YHR129C 1155 nt2.97□□□□□ -1.93
VPS13Q07878 SRT1YMR101C 1032 nt2.97□□□□□ -1.93
VPS13Q07878 PAM1YDR251W 2493 nt2.97□□□□□ -1.93
VPS13Q07878 YJL132WYJL132W 2253 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms