Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPL38P63173 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.08■□□□□ 0.97
RPL38P63173 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RPL38P63173 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPL38P63173 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPL38P63173 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPL38P63173 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPL38P63173 C17orf82-201ENST00000623772 1530 ntBASIC21.08■□□□□ 0.96
RPL38P63173 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPL38P63173 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.07■□□□□ 0.96
RPL38P63173 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL38P63173 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RPL38P63173 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL38P63173 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL38P63173 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPL38P63173 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RPL38P63173 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPL38P63173 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.06■□□□□ 0.96
RPL38P63173 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.06■□□□□ 0.96
RPL38P63173 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPL38P63173 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.06■□□□□ 0.96
RPL38P63173 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RPL38P63173 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.06■□□□□ 0.96
RPL38P63173 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.05■□□□□ 0.96
RPL38P63173 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL38P63173 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL38P63173 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPL38P63173 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPL38P63173 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 AC007375.3-201ENST00000600936 2314 ntBASIC21.04■□□□□ 0.96
RPL38P63173 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 FBXW4P1-201ENST00000426721 2239 ntBASIC21.04■□□□□ 0.96
RPL38P63173 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
RPL38P63173 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
RPL38P63173 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPL38P63173 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPL38P63173 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPL38P63173 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.03■□□□□ 0.96
RPL38P63173 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPL38P63173 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.02■□□□□ 0.96
RPL38P63173 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL38P63173 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.02■□□□□ 0.96
RPL38P63173 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL38P63173 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL38P63173 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.02■□□□□ 0.96
RPL38P63173 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RPL38P63173 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPL38P63173 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
RPL38P63173 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RPL38P63173 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.01■□□□□ 0.95
RPL38P63173 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPL38P63173 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPL38P63173 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.01■□□□□ 0.95
RPL38P63173 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL38P63173 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.01■□□□□ 0.95
RPL38P63173 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPL38P63173 UNC93B8-201ENST00000511903 705 ntBASIC21.01■□□□□ 0.95
RPL38P63173 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPL38P63173 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPL38P63173 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21■□□□□ 0.95
RPL38P63173 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
RPL38P63173 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21■□□□□ 0.95
RPL38P63173 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21■□□□□ 0.95
RPL38P63173 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RPL38P63173 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21■□□□□ 0.95
RPL38P63173 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL38P63173 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.99■□□□□ 0.95
RPL38P63173 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPL38P63173 MIR6724-1-201ENST00000616420 92 ntBASIC20.99■□□□□ 0.95
RPL38P63173 MIR6724-2-201ENST00000616483 92 ntBASIC20.99■□□□□ 0.95
RPL38P63173 MIR6724-4-201ENST00000617390 92 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms