Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3S2P59780 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3S2P59780 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S2P59780 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
AP3S2P59780 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.8■□□□□ 0.6
AP3S2P59780 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3S2P59780 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
AP3S2P59780 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.79■□□□□ 0.6
AP3S2P59780 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3S2P59780 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3S2P59780 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3S2P59780 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP3S2P59780 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S2P59780 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S2P59780 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S2P59780 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S2P59780 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S2P59780 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP3S2P59780 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S2P59780 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
AP3S2P59780 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S2P59780 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
AP3S2P59780 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
AP3S2P59780 ZNRF2P2-203ENST00000454624 420 ntBASIC18.77■□□□□ 0.6
AP3S2P59780 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.77■□□□□ 0.6
AP3S2P59780 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S2P59780 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.77■□□□□ 0.59
AP3S2P59780 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3S2P59780 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3S2P59780 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3S2P59780 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.77■□□□□ 0.59
AP3S2P59780 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.77■□□□□ 0.59
AP3S2P59780 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 LINC01521-201ENST00000504184 1943 ntBASIC18.76■□□□□ 0.59
AP3S2P59780 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3S2P59780 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
AP3S2P59780 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
AP3S2P59780 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3S2P59780 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.76■□□□□ 0.59
AP3S2P59780 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3S2P59780 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S2P59780 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
AP3S2P59780 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3S2P59780 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.75■□□□□ 0.59
AP3S2P59780 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.75■□□□□ 0.59
AP3S2P59780 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S2P59780 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3S2P59780 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 RPS2P7-201ENST00000447334 885 ntBASIC18.74■□□□□ 0.59
AP3S2P59780 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3S2P59780 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.74■□□□□ 0.59
AP3S2P59780 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
AP3S2P59780 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3S2P59780 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S2P59780 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms