Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN18P56856 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN18P56856 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN18P56856 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN18P56856 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN18P56856 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN18P56856 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN18P56856 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN18P56856 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN18P56856 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN18P56856 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN18P56856 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN18P56856 AC087623.3-201ENST00000607047 1098 ntBASIC19.63■□□□□ 0.73
CLDN18P56856 AC105233.4-201ENST00000642045 216 ntBASIC19.63■□□□□ 0.73
CLDN18P56856 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN18P56856 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN18P56856 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN18P56856 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLDN18P56856 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN18P56856 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN18P56856 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN18P56856 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN18P56856 YBX1P1-201ENST00000445822 960 ntBASIC19.62■□□□□ 0.73
CLDN18P56856 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.62■□□□□ 0.73
CLDN18P56856 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN18P56856 MIR5787-201ENST00000611784 55 ntBASIC19.62■□□□□ 0.73
CLDN18P56856 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN18P56856 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN18P56856 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN18P56856 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN18P56856 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN18P56856 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN18P56856 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.6■□□□□ 0.73
CLDN18P56856 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
CLDN18P56856 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CLDN18P56856 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN18P56856 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN18P56856 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN18P56856 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN18P56856 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN18P56856 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN18P56856 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN18P56856 OXCT2P1-201ENST00000447263 1535 ntBASIC19.6■□□□□ 0.73
CLDN18P56856 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN18P56856 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN18P56856 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN18P56856 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN18P56856 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN18P56856 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN18P56856 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLDN18P56856 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN18P56856 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN18P56856 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN18P56856 DUSP8P5-201ENST00000422884 1815 ntBASIC19.59■□□□□ 0.73
CLDN18P56856 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN18P56856 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN18P56856 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN18P56856 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN18P56856 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN18P56856 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN18P56856 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN18P56856 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLDN18P56856 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN18P56856 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN18P56856 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN18P56856 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN18P56856 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN18P56856 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN18P56856 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN18P56856 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN18P56856 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN18P56856 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLDN18P56856 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN18P56856 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN18P56856 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN18P56856 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN18P56856 AC123595.1-201ENST00000440769 1046 ntBASIC19.57■□□□□ 0.72
CLDN18P56856 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN18P56856 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN18P56856 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN18P56856 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms