Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
GFERP55789 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
GFERP55789 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GFERP55789 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.05■□□□□ 0.96
GFERP55789 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
GFERP55789 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.05■□□□□ 0.96
GFERP55789 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.05■□□□□ 0.96
GFERP55789 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.05■□□□□ 0.96
GFERP55789 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFERP55789 AC093323.1-202ENST00000635031 2045 ntBASIC21.05■□□□□ 0.96
GFERP55789 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.05■□□□□ 0.96
GFERP55789 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
GFERP55789 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
GFERP55789 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GFERP55789 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
GFERP55789 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 AC022517.1-201ENST00000592429 346 ntBASIC21.04■□□□□ 0.96
GFERP55789 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GFERP55789 DUSP8P3-201ENST00000399571 1760 ntBASIC21.04■□□□□ 0.96
GFERP55789 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.04■□□□□ 0.96
GFERP55789 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.04■□□□□ 0.96
GFERP55789 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFERP55789 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.03■□□□□ 0.96
GFERP55789 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.03■□□□□ 0.96
GFERP55789 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.03■□□□□ 0.96
GFERP55789 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFERP55789 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.03■□□□□ 0.96
GFERP55789 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFERP55789 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GFERP55789 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFERP55789 SMUG1P1-201ENST00000590640 811 ntBASIC21.02■□□□□ 0.96
GFERP55789 TPRG1LP1-201ENST00000598702 760 ntBASIC21.02■□□□□ 0.96
GFERP55789 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GFERP55789 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.02■□□□□ 0.96
GFERP55789 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GFERP55789 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.02■□□□□ 0.95
GFERP55789 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
GFERP55789 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GFERP55789 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
GFERP55789 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GFERP55789 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
GFERP55789 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.01■□□□□ 0.95
GFERP55789 NTF6G-201ENST00000591094 616 ntBASIC21.01■□□□□ 0.95
GFERP55789 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
GFERP55789 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.01■□□□□ 0.95
GFERP55789 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.01■□□□□ 0.95
GFERP55789 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21■□□□□ 0.95
GFERP55789 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21■□□□□ 0.95
GFERP55789 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
GFERP55789 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21■□□□□ 0.95
GFERP55789 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21■□□□□ 0.95
GFERP55789 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 OXCT2P1-201ENST00000447263 1535 ntBASIC20.99■□□□□ 0.95
GFERP55789 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
GFERP55789 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.99■□□□□ 0.95
GFERP55789 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.99■□□□□ 0.95
GFERP55789 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.99■□□□□ 0.95
GFERP55789 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.99■□□□□ 0.95
GFERP55789 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.99■□□□□ 0.95
GFERP55789 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFERP55789 BX005040.4-201ENST00000637145 1518 ntBASIC20.99■□□□□ 0.95
GFERP55789 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GFERP55789 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFERP55789 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GFERP55789 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GFERP55789 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms