Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GABRA4P48169 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.87■□□□□ 0.93
GABRA4P48169 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.86■□□□□ 0.93
GABRA4P48169 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.86■□□□□ 0.93
GABRA4P48169 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.86■□□□□ 0.93
GABRA4P48169 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA4P48169 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.86■□□□□ 0.93
GABRA4P48169 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.86■□□□□ 0.93
GABRA4P48169 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA4P48169 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.86■□□□□ 0.93
GABRA4P48169 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA4P48169 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
GABRA4P48169 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GABRA4P48169 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.85■□□□□ 0.93
GABRA4P48169 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.85■□□□□ 0.93
GABRA4P48169 AC123595.1-201ENST00000440769 1046 ntBASIC20.85■□□□□ 0.93
GABRA4P48169 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.85■□□□□ 0.93
GABRA4P48169 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.85■□□□□ 0.93
GABRA4P48169 AC087239.1-201ENST00000622671 572 ntBASIC20.85■□□□□ 0.93
GABRA4P48169 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA4P48169 OXCT2P1-201ENST00000447263 1535 ntBASIC20.84■□□□□ 0.93
GABRA4P48169 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GABRA4P48169 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA4P48169 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.84■□□□□ 0.93
GABRA4P48169 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA4P48169 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.84■□□□□ 0.93
GABRA4P48169 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA4P48169 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.84■□□□□ 0.93
GABRA4P48169 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA4P48169 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA4P48169 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GABRA4P48169 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GABRA4P48169 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.83■□□□□ 0.93
GABRA4P48169 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.83■□□□□ 0.93
GABRA4P48169 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GABRA4P48169 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GABRA4P48169 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GABRA4P48169 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
GABRA4P48169 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.83■□□□□ 0.93
GABRA4P48169 SMUG1P1-201ENST00000590640 811 ntBASIC20.83■□□□□ 0.93
GABRA4P48169 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.83■□□□□ 0.93
GABRA4P48169 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.83■□□□□ 0.92
GABRA4P48169 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
GABRA4P48169 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GABRA4P48169 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.83■□□□□ 0.92
GABRA4P48169 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
GABRA4P48169 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.82■□□□□ 0.92
GABRA4P48169 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GABRA4P48169 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GABRA4P48169 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GABRA4P48169 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GABRA4P48169 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GABRA4P48169 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
GABRA4P48169 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.82■□□□□ 0.92
GABRA4P48169 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.82■□□□□ 0.92
GABRA4P48169 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GABRA4P48169 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GABRA4P48169 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GABRA4P48169 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.81■□□□□ 0.92
GABRA4P48169 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GABRA4P48169 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GABRA4P48169 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.81■□□□□ 0.92
GABRA4P48169 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GABRA4P48169 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.81■□□□□ 0.92
GABRA4P48169 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GABRA4P48169 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.81■□□□□ 0.92
GABRA4P48169 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GABRA4P48169 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GABRA4P48169 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GABRA4P48169 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GABRA4P48169 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.8■□□□□ 0.92
GABRA4P48169 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
GABRA4P48169 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 LINC01960-201ENST00000563759 1884 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
GABRA4P48169 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
GABRA4P48169 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 AL162430.1-201ENST00000480705 870 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L2-201ENST00000561772 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L6-201ENST00000626483 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L1-201ENST00000627662 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L8-201ENST00000629013 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L3-201ENST00000630187 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L7-201ENST00000630678 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 DUX4L5-201ENST00000630834 1275 ntBASIC20.8■□□□□ 0.92
GABRA4P48169 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GABRA4P48169 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms