Protein–RNA interactions for Protein: P42263

GRIA3, Glutamate receptor 3, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3P42263 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA3P42263 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA3P42263 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.5■■□□□ 1.03
GRIA3P42263 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA3P42263 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA3P42263 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GRIA3P42263 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA3P42263 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIA3P42263 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 PBX2P1-201ENST00000493219 1291 ntBASIC21.49■■□□□ 1.03
GRIA3P42263 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIA3P42263 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIA3P42263 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA3P42263 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIA3P42263 LINC01529-204ENST00000636474 1715 ntBASIC21.49■■□□□ 1.03
GRIA3P42263 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
GRIA3P42263 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GRIA3P42263 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA3P42263 DUX4L4-201ENST00000566884 1269 ntBASIC21.48■■□□□ 1.03
GRIA3P42263 AL136162.1-201ENST00000607711 1078 ntBASIC21.48■■□□□ 1.03
GRIA3P42263 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
GRIA3P42263 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA3P42263 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIA3P42263 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA3P42263 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA3P42263 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.47■■□□□ 1.03
GRIA3P42263 SERBP1P1-201ENST00000396021 1160 ntBASIC21.47■■□□□ 1.03
GRIA3P42263 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.47■■□□□ 1.03
GRIA3P42263 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIA3P42263 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.47■■□□□ 1.03
GRIA3P42263 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.47■■□□□ 1.03
GRIA3P42263 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA3P42263 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
GRIA3P42263 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
GRIA3P42263 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
GRIA3P42263 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
GRIA3P42263 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.46■■□□□ 1.03
GRIA3P42263 AC024257.2-201ENST00000549699 147 ntBASIC21.46■■□□□ 1.03
GRIA3P42263 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.46■■□□□ 1.03
GRIA3P42263 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.46■■□□□ 1.03
GRIA3P42263 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA3P42263 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
GRIA3P42263 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 AC007375.3-201ENST00000600936 2314 ntBASIC21.45■■□□□ 1.02
GRIA3P42263 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.45■■□□□ 1.02
GRIA3P42263 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
GRIA3P42263 MIR3181-201ENST00000578512 73 ntBASIC21.45■■□□□ 1.02
GRIA3P42263 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GRIA3P42263 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.45■■□□□ 1.02
GRIA3P42263 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GRIA3P42263 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GRIA3P42263 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GRIA3P42263 pRNA.6-201ENST00000610482 90 ntBASIC21.44■■□□□ 1.02
GRIA3P42263 pRNA.5-201ENST00000612139 90 ntBASIC21.44■■□□□ 1.02
GRIA3P42263 pRNA.11-201ENST00000618423 90 ntBASIC21.44■■□□□ 1.02
GRIA3P42263 pRNA.13-201ENST00000619112 90 ntBASIC21.44■■□□□ 1.02
GRIA3P42263 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.44■■□□□ 1.02
GRIA3P42263 AL353803.4-201ENST00000565882 1934 ntBASIC21.44■■□□□ 1.02
GRIA3P42263 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GRIA3P42263 AC135279.3-201ENST00000610945 1311 ntBASIC21.44■■□□□ 1.02
GRIA3P42263 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
GRIA3P42263 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.44■■□□□ 1.02
GRIA3P42263 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.44■■□□□ 1.02
GRIA3P42263 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms