Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RIM4YHL024W 2142 nt3.5□□□□□ -1.85
CDC40P40968 SMI1YGR229C 1518 nt3.5□□□□□ -1.85
CDC40P40968 MNL1YHR204W 2391 nt3.5□□□□□ -1.85
CDC40P40968 YCR007CYCR007C 720 nt3.5□□□□□ -1.85
CDC40P40968 MCM21YDR318W 1107 nt3.5□□□□□ -1.85
CDC40P40968 HSP31YDR533C 714 nt3.5□□□□□ -1.85
CDC40P40968 YGR149WYGR149W 1299 nt3.5□□□□□ -1.85
CDC40P40968 PDX1YGR193C 1233 nt3.5□□□□□ -1.85
CDC40P40968 IRC9YJL142C 393 nt3.5□□□□□ -1.85
CDC40P40968 REE1YJL217W 597 nt3.5□□□□□ -1.85
CDC40P40968 ELF1YKL160W 438 nt3.5□□□□□ -1.85
CDC40P40968 ADD66YKL206C 804 nt3.5□□□□□ -1.85
CDC40P40968 ATP14YLR295C 375 nt3.5□□□□□ -1.85
CDC40P40968 YNL134CYNL134C 1131 nt3.5□□□□□ -1.85
CDC40P40968 YPL071CYPL071C 471 nt3.5□□□□□ -1.85
CDC40P40968 HPA2YPR193C 471 nt3.5□□□□□ -1.85
CDC40P40968 IMD4YML056C 1575 nt3.5□□□□□ -1.85
CDC40P40968 ORC4YPR162C 1590 nt3.5□□□□□ -1.85
CDC40P40968 CLG1YGL215W 1359 nt3.5□□□□□ -1.85
CDC40P40968 MGA1YGR249W 1371 nt3.5□□□□□ -1.85
CDC40P40968 FAS1YKL182W 6156 nt3.5□□□□□ -1.85
CDC40P40968 PRM15YMR278W 1869 nt3.5□□□□□ -1.85
CDC40P40968 ULP1YPL020C 1866 nt3.5□□□□□ -1.85
CDC40P40968 SLM2YNL047C 1971 nt3.49□□□□□ -1.85
CDC40P40968 THI13YDL244W 1023 nt3.49□□□□□ -1.85
CDC40P40968 RPC11YDR045C 333 nt3.49□□□□□ -1.85
CDC40P40968 PHM6YDR281C 315 nt3.49□□□□□ -1.85
CDC40P40968 SNA2YDR525W-A 240 nt3.49□□□□□ -1.85
CDC40P40968 NOP16YER002W 696 nt3.49□□□□□ -1.85
CDC40P40968 PIC2YER053C 903 nt3.49□□□□□ -1.85
CDC40P40968 SCL1YGL011C 759 nt3.49□□□□□ -1.85
CDC40P40968 tX(XXX)DtX(XXX)D 100 nt3.49□□□□□ -1.85
CDC40P40968 THI11YJR156C 1023 nt3.49□□□□□ -1.85
CDC40P40968 PRE7YBL041W 726 nt3.49□□□□□ -1.85
CDC40P40968 REG2YBR050C 1017 nt3.49□□□□□ -1.85
CDC40P40968 MET16YPR167C 786 nt3.49□□□□□ -1.85
CDC40P40968 REI1YBR267W 1182 nt3.49□□□□□ -1.85
CDC40P40968 PBN1YCL052C 1251 nt3.49□□□□□ -1.85
CDC40P40968 PRP9YDL030W 1593 nt3.49□□□□□ -1.85
CDC40P40968 TUB2YFL037W 1374 nt3.49□□□□□ -1.85
CDC40P40968 TPA1YER049W 1935 nt3.48□□□□□ -1.85
CDC40P40968 HRR25YPL204W 1485 nt3.48□□□□□ -1.85
CDC40P40968 MTH1YDR277C 1302 nt3.48□□□□□ -1.85
CDC40P40968 REB1YBR049C 2433 nt3.48□□□□□ -1.85
CDC40P40968 CIT1YNR001C 1440 nt3.48□□□□□ -1.85
CDC40P40968 SHU2YDR078C 672 nt3.48□□□□□ -1.85
CDC40P40968 ARG82YDR173C 1068 nt3.48□□□□□ -1.85
CDC40P40968 LSB1YGR136W 726 nt3.48□□□□□ -1.85
CDC40P40968 MIC26YGR235C 702 nt3.48□□□□□ -1.85
CDC40P40968 PEX21YGR239C 867 nt3.48□□□□□ -1.85
CDC40P40968 VPS29YHR012W 849 nt3.48□□□□□ -1.85
CDC40P40968 GEP4YHR100C 558 nt3.48□□□□□ -1.85
CDC40P40968 LSO1YJR005C-A 282 nt3.48□□□□□ -1.85
CDC40P40968 MSA2YKR077W 1092 nt3.48□□□□□ -1.85
CDC40P40968 YMR010WYMR010W 1218 nt3.48□□□□□ -1.85
CDC40P40968 YNL296WYNL296W 315 nt3.48□□□□□ -1.85
CDC40P40968 RPS11BYBR048W 471 nt3.48□□□□□ -1.85
CDC40P40968 snR17asnR17a 333 nt3.48□□□□□ -1.85
CDC40P40968 MRPL37YBR268W 318 nt3.48□□□□□ -1.85
CDC40P40968 FLO10YKR102W 3510 nt3.48□□□□□ -1.85
CDC40P40968 SER33YIL074C 1410 nt3.47□□□□□ -1.85
CDC40P40968 PUT1YLR142W 1431 nt3.47□□□□□ -1.85
CDC40P40968 YAR019W-AYAR019W-A 333 nt3.47□□□□□ -1.85
CDC40P40968 RAD10YML095C 633 nt3.47□□□□□ -1.85
CDC40P40968 YNR042WYNR042W 429 nt3.47□□□□□ -1.85
CDC40P40968 REX4YOL080C 870 nt3.47□□□□□ -1.85
CDC40P40968 SNF8YPL002C 702 nt3.47□□□□□ -1.85
CDC40P40968 USV1YPL230W 1176 nt3.47□□□□□ -1.85
CDC40P40968 YPR169W-AYPR169W-A 219 nt3.47□□□□□ -1.85
CDC40P40968 YPR170W-BYPR170W-B 258 nt3.47□□□□□ -1.85
CDC40P40968 NTH1YDR001C 2256 nt3.47□□□□□ -1.85
CDC40P40968 AZR1YGR224W 1842 nt3.47□□□□□ -1.85
CDC40P40968 ZDS2YML109W 2829 nt3.46□□□□□ -1.86
CDC40P40968 GPI10YGL142C 1851 nt3.46□□□□□ -1.86
CDC40P40968 SHE1YBL031W 1017 nt3.46□□□□□ -1.86
CDC40P40968 MCM1YMR043W 861 nt3.46□□□□□ -1.86
CDC40P40968 URE2YNL229C 1065 nt3.46□□□□□ -1.86
CDC40P40968 VPS69YPR087W 321 nt3.46□□□□□ -1.86
CDC40P40968 RIB5YBR256C 717 nt3.46□□□□□ -1.86
CDC40P40968 ALG1YBR110W 1350 nt3.46□□□□□ -1.86
CDC40P40968 GPI1YGR216C 1830 nt3.46□□□□□ -1.86
CDC40P40968 YGR027W-BYGR027W-B 5268 nt3.46□□□□□ -1.86
CDC40P40968 YLR227W-BYLR227W-B 5268 nt3.46□□□□□ -1.86
CDC40P40968 YPR158C-DYPR158C-D 5268 nt3.46□□□□□ -1.86
CDC40P40968 CUE3YGL110C 1875 nt3.45□□□□□ -1.86
CDC40P40968 MGR3YMR115W 1506 nt3.45□□□□□ -1.86
CDC40P40968 MED2YDL005C 1296 nt3.45□□□□□ -1.86
CDC40P40968 ARO2YGL148W 1131 nt3.45□□□□□ -1.86
CDC40P40968 YNG2YHR090C 849 nt3.45□□□□□ -1.86
CDC40P40968 LOH1YJL038C 660 nt3.45□□□□□ -1.86
CDC40P40968 RPS4AYJR145C 786 nt3.45□□□□□ -1.86
CDC40P40968 SIL1YOL031C 1266 nt3.45□□□□□ -1.86
CDC40P40968 STP22YCL008C 1158 nt3.45□□□□□ -1.86
CDC40P40968 HAP4YKL109W 1665 nt3.45□□□□□ -1.86
CDC40P40968 SAP4YGL229C 2457 nt3.45□□□□□ -1.86
CDC40P40968 TPD3YAL016W 1908 nt3.44□□□□□ -1.86
CDC40P40968 DSS1YMR287C 2910 nt3.44□□□□□ -1.86
CDC40P40968 POL1YNL102W 4407 nt3.44□□□□□ -1.86
CDC40P40968 PWP2YCR057C 2772 nt3.44□□□□□ -1.86
CDC40P40968 TSR1YDL060W 2367 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms