Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCK1P35558 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.98■■□□□ 1.27
PCK1P35558 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCK1P35558 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCK1P35558 AC006455.2-201ENST00000429931 906 ntBASIC22.98■■□□□ 1.27
PCK1P35558 SRD5A1P1-201ENST00000442297 786 ntBASIC22.98■■□□□ 1.27
PCK1P35558 ECEL1P1-201ENST00000373592 1742 ntBASIC22.98■■□□□ 1.27
PCK1P35558 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCK1P35558 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.98■■□□□ 1.27
PCK1P35558 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PCK1P35558 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCK1P35558 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.97■■□□□ 1.27
PCK1P35558 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.97■■□□□ 1.27
PCK1P35558 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.97■■□□□ 1.27
PCK1P35558 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.97■■□□□ 1.27
PCK1P35558 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCK1P35558 AC242852.2-201ENST00000615738 1807 ntBASIC22.96■■□□□ 1.27
PCK1P35558 LINC01960-201ENST00000563759 1884 ntBASIC22.96■■□□□ 1.27
PCK1P35558 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.96■■□□□ 1.27
PCK1P35558 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.96■■□□□ 1.27
PCK1P35558 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCK1P35558 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCK1P35558 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.96■■□□□ 1.27
PCK1P35558 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCK1P35558 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCK1P35558 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCK1P35558 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.95■■□□□ 1.27
PCK1P35558 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.95■■□□□ 1.26
PCK1P35558 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.95■■□□□ 1.26
PCK1P35558 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.95■■□□□ 1.26
PCK1P35558 AC092171.4-201ENST00000609130 632 ntBASIC22.95■■□□□ 1.26
PCK1P35558 pRNA.6-201ENST00000610482 90 ntBASIC22.95■■□□□ 1.26
PCK1P35558 pRNA.5-201ENST00000612139 90 ntBASIC22.95■■□□□ 1.26
PCK1P35558 pRNA.11-201ENST00000618423 90 ntBASIC22.95■■□□□ 1.26
PCK1P35558 pRNA.13-201ENST00000619112 90 ntBASIC22.95■■□□□ 1.26
PCK1P35558 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCK1P35558 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.94■■□□□ 1.26
PCK1P35558 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.94■■□□□ 1.26
PCK1P35558 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PCK1P35558 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.94■■□□□ 1.26
PCK1P35558 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
PCK1P35558 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.94■■□□□ 1.26
PCK1P35558 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCK1P35558 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PCK1P35558 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.93■■□□□ 1.26
PCK1P35558 AC133637.1-201ENST00000624115 1537 ntBASIC22.93■■□□□ 1.26
PCK1P35558 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.93■■□□□ 1.26
PCK1P35558 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.93■■□□□ 1.26
PCK1P35558 MIR4466-201ENST00000606121 54 ntBASIC22.93■■□□□ 1.26
PCK1P35558 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.93■■□□□ 1.26
PCK1P35558 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PCK1P35558 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PCK1P35558 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PCK1P35558 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCK1P35558 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCK1P35558 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCK1P35558 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PCK1P35558 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.92■■□□□ 1.26
PCK1P35558 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.92■■□□□ 1.26
PCK1P35558 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCK1P35558 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCK1P35558 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
PCK1P35558 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PCK1P35558 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCK1P35558 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.91■■□□□ 1.26
PCK1P35558 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.91■■□□□ 1.26
PCK1P35558 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.91■■□□□ 1.26
PCK1P35558 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.91■■□□□ 1.26
PCK1P35558 MIR3181-201ENST00000578512 73 ntBASIC22.91■■□□□ 1.26
PCK1P35558 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.91■■□□□ 1.26
PCK1P35558 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PCK1P35558 LINC00526-201ENST00000581067 1875 ntBASIC22.91■■□□□ 1.26
PCK1P35558 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms