Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
EPHA3P29320 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.29■■□□□ 1
EPHA3P29320 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
EPHA3P29320 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.28■■□□□ 1
EPHA3P29320 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA3P29320 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA3P29320 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA3P29320 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA3P29320 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.28■■□□□ 1
EPHA3P29320 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.28■■□□□ 1
EPHA3P29320 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.28■■□□□ 1
EPHA3P29320 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.28■■□□□ 1
EPHA3P29320 FP325331.1-202ENST00000623531 1380 ntBASIC21.27■■□□□ 1
EPHA3P29320 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
EPHA3P29320 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EPHA3P29320 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.27■■□□□ 1
EPHA3P29320 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.27■■□□□ 1
EPHA3P29320 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.27■■□□□ 1
EPHA3P29320 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
EPHA3P29320 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.27■■□□□ 1
EPHA3P29320 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.27■■□□□ 1
EPHA3P29320 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.27■■□□□ 1
EPHA3P29320 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.27■■□□□ 1
EPHA3P29320 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.27■■□□□ 1
EPHA3P29320 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EPHA3P29320 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
EPHA3P29320 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
EPHA3P29320 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EPHA3P29320 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EPHA3P29320 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
EPHA3P29320 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
EPHA3P29320 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.26■□□□□ 0.99
EPHA3P29320 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.26■□□□□ 0.99
EPHA3P29320 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA3P29320 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA3P29320 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
EPHA3P29320 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA3P29320 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA3P29320 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA3P29320 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA3P29320 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA3P29320 AC005229.4-201ENST00000610085 2198 ntBASIC21.24■□□□□ 0.99
EPHA3P29320 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA3P29320 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA3P29320 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA3P29320 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHA3P29320 AC103834.1-201ENST00000520383 144 ntBASIC21.24■□□□□ 0.99
EPHA3P29320 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
EPHA3P29320 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA3P29320 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHA3P29320 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHA3P29320 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
EPHA3P29320 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
EPHA3P29320 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA3P29320 AC009086.3-201ENST00000623486 1008 ntBASIC21.23■□□□□ 0.99
EPHA3P29320 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
EPHA3P29320 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA3P29320 AC005703.6-201ENST00000623265 1329 ntBASIC21.23■□□□□ 0.99
EPHA3P29320 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA3P29320 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA3P29320 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.23■□□□□ 0.99
EPHA3P29320 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA3P29320 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
EPHA3P29320 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHA3P29320 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHA3P29320 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
EPHA3P29320 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.22■□□□□ 0.99
EPHA3P29320 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA3P29320 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.22■□□□□ 0.99
EPHA3P29320 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
EPHA3P29320 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.21■□□□□ 0.99
EPHA3P29320 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA3P29320 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA3P29320 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHA3P29320 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA3P29320 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHA3P29320 AC103724.3-201ENST00000564481 992 ntBASIC21.21■□□□□ 0.99
EPHA3P29320 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
EPHA3P29320 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA3P29320 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms