Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.41■□□□□ 0.86
CHMP24386 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP24386 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CHMP24386 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP24386 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP24386 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP24386 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHMP24386 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP24386 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP24386 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CHMP24386 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMP24386 AC092171.4-201ENST00000609130 632 ntBASIC20.4■□□□□ 0.86
CHMP24386 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CHMP24386 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP24386 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP24386 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.39■□□□□ 0.86
CHMP24386 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP24386 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP24386 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP24386 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP24386 C17orf82-201ENST00000623772 1530 ntBASIC20.39■□□□□ 0.85
CHMP24386 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP24386 AC019069.1-201ENST00000610008 1333 ntBASIC20.39■□□□□ 0.85
CHMP24386 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP24386 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CHMP24386 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP24386 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP24386 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
CHMP24386 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMP24386 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP24386 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMP24386 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 DUX4L19-201ENST00000557448 1267 ntBASIC20.38■□□□□ 0.85
CHMP24386 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP24386 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP24386 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP24386 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP24386 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP24386 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP24386 AC139530.1-201ENST00000575312 1977 ntBASIC20.37■□□□□ 0.85
CHMP24386 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP24386 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP24386 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP24386 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHMP24386 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP24386 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP24386 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP24386 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHMP24386 AC241377.3-202ENST00000626088 1088 ntBASIC20.36■□□□□ 0.85
CHMP24386 AC241585.3-202ENST00000628937 1088 ntBASIC20.36■□□□□ 0.85
CHMP24386 AC245100.8-202ENST00000629247 1058 ntBASIC20.36■□□□□ 0.85
CHMP24386 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP24386 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP24386 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP24386 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP24386 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP24386 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP24386 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHMP24386 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP24386 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP24386 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP24386 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP24386 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHMP24386 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms