Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH3P22223 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.34■■□□□ 1.01
CDH3P22223 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.34■■□□□ 1.01
CDH3P22223 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.34■■□□□ 1.01
CDH3P22223 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH3P22223 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH3P22223 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.34■■□□□ 1.01
CDH3P22223 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH3P22223 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH3P22223 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDH3P22223 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CDH3P22223 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH3P22223 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDH3P22223 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CDH3P22223 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.33■■□□□ 1.01
CDH3P22223 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH3P22223 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.33■■□□□ 1.01
CDH3P22223 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.33■■□□□ 1.01
CDH3P22223 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDH3P22223 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CDH3P22223 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH3P22223 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH3P22223 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDH3P22223 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDH3P22223 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.32■■□□□ 1
CDH3P22223 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH3P22223 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
CDH3P22223 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH3P22223 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDH3P22223 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.32■■□□□ 1
CDH3P22223 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.32■■□□□ 1
CDH3P22223 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.32■■□□□ 1
CDH3P22223 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.32■■□□□ 1
CDH3P22223 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH3P22223 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDH3P22223 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDH3P22223 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDH3P22223 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.31■■□□□ 1
CDH3P22223 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH3P22223 OR2I1P-207ENST00000453522 948 ntBASIC21.31■■□□□ 1
CDH3P22223 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.31■■□□□ 1
CDH3P22223 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH3P22223 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDH3P22223 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.3■■□□□ 1
CDH3P22223 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH3P22223 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.3■■□□□ 1
CDH3P22223 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.3■■□□□ 1
CDH3P22223 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.3■■□□□ 1
CDH3P22223 AC010525.1-201ENST00000585559 441 ntBASIC21.3■■□□□ 1
CDH3P22223 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.3■■□□□ 1
CDH3P22223 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.3■■□□□ 1
CDH3P22223 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CDH3P22223 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH3P22223 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH3P22223 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH3P22223 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH3P22223 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDH3P22223 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CDH3P22223 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDH3P22223 ANOS2P-203ENST00000472227 1816 ntBASIC21.29■■□□□ 1
CDH3P22223 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH3P22223 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CDH3P22223 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.28■■□□□ 1
CDH3P22223 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.28■■□□□ 1
CDH3P22223 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.28■■□□□ 1
CDH3P22223 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDH3P22223 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.28■■□□□ 1
CDH3P22223 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.28■■□□□ 1
CDH3P22223 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDH3P22223 AC004687.1-201ENST00000579003 1625 ntBASIC21.28■■□□□ 1
CDH3P22223 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDH3P22223 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH3P22223 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDH3P22223 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.27■■□□□ 1
CDH3P22223 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 IRS3P-201ENST00000223076 1006 ntBASIC21.27■■□□□ 1
CDH3P22223 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.27■■□□□ 1
CDH3P22223 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDH3P22223 SLC25A24-204ENST00000569674 2357 ntBASIC21.27■■□□□ 1
CDH3P22223 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CDH3P22223 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH3P22223 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH3P22223 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CDH3P22223 TSPY26P-201ENST00000476365 1326 ntBASIC21.27■□□□□ 0.99
CDH3P22223 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.27■□□□□ 0.99
CDH3P22223 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.27■□□□□ 0.99
CDH3P22223 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH3P22223 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH3P22223 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms