Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CD53P19397 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CD53P19397 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CD53P19397 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.81■□□□□ 0.76
CD53P19397 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CD53P19397 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CD53P19397 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CD53P19397 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.8■□□□□ 0.76
CD53P19397 AC007375.3-201ENST00000600936 2314 ntBASIC19.8■□□□□ 0.76
CD53P19397 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CD53P19397 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 AF213884.3-201ENST00000563833 479 ntBASIC19.8■□□□□ 0.76
CD53P19397 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.8■□□□□ 0.76
CD53P19397 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.8■□□□□ 0.76
CD53P19397 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CD53P19397 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 AC092053.2-201ENST00000640557 1818 ntBASIC19.8■□□□□ 0.76
CD53P19397 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD53P19397 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.79■□□□□ 0.76
CD53P19397 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.79■□□□□ 0.76
CD53P19397 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
CD53P19397 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CD53P19397 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.79■□□□□ 0.76
CD53P19397 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CD53P19397 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD53P19397 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD53P19397 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CD53P19397 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CD53P19397 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.78■□□□□ 0.76
CD53P19397 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.78■□□□□ 0.76
CD53P19397 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.78■□□□□ 0.76
CD53P19397 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD53P19397 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.78■□□□□ 0.76
CD53P19397 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD53P19397 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.78■□□□□ 0.76
CD53P19397 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.78■□□□□ 0.76
CD53P19397 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CD53P19397 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD53P19397 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD53P19397 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD53P19397 AC139530.1-201ENST00000575312 1977 ntBASIC19.77■□□□□ 0.76
CD53P19397 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CD53P19397 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD53P19397 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD53P19397 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
CD53P19397 MIR939-201ENST00000401314 82 ntBASIC19.77■□□□□ 0.76
CD53P19397 DUX4L19-201ENST00000557448 1267 ntBASIC19.77■□□□□ 0.76
CD53P19397 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD53P19397 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CD53P19397 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD53P19397 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD53P19397 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD53P19397 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CD53P19397 AC131274.2-201ENST00000580697 1507 ntBASIC19.76■□□□□ 0.75
CD53P19397 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD53P19397 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.76■□□□□ 0.75
CD53P19397 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CD53P19397 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 AP001330.3-201ENST00000520123 633 ntBASIC19.76■□□□□ 0.75
CD53P19397 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.76■□□□□ 0.75
CD53P19397 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.76■□□□□ 0.75
CD53P19397 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD53P19397 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.76■□□□□ 0.75
CD53P19397 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
CD53P19397 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.75■□□□□ 0.75
CD53P19397 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.75■□□□□ 0.75
CD53P19397 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.75■□□□□ 0.75
CD53P19397 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.75■□□□□ 0.75
CD53P19397 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms