Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.63■□□□□ 0.73
HLA-DOBP13765 AC092171.4-201ENST00000609130 632 ntBASIC19.63■□□□□ 0.73
HLA-DOBP13765 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DOBP13765 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DOBP13765 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DOBP13765 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DOBP13765 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DOBP13765 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DOBP13765 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 SYT6-210ENST00000641643 1587 ntBASIC19.61■□□□□ 0.73
HLA-DOBP13765 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 AC079834.2-201ENST00000609776 1949 ntBASIC19.61■□□□□ 0.73
HLA-DOBP13765 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DOBP13765 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOBP13765 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 AC242852.2-201ENST00000615738 1807 ntBASIC19.6■□□□□ 0.73
HLA-DOBP13765 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOBP13765 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DOBP13765 ECEL1P1-201ENST00000373592 1742 ntBASIC19.59■□□□□ 0.73
HLA-DOBP13765 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOBP13765 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOBP13765 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOBP13765 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOBP13765 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOBP13765 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOBP13765 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOBP13765 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOBP13765 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DOBP13765 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOBP13765 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOBP13765 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.58■□□□□ 0.72
HLA-DOBP13765 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DOBP13765 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 LINC00526-201ENST00000581067 1875 ntBASIC19.58■□□□□ 0.72
HLA-DOBP13765 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DOBP13765 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOBP13765 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HLA-DOBP13765 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DOBP13765 AC139530.1-201ENST00000575312 1977 ntBASIC19.57■□□□□ 0.72
HLA-DOBP13765 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOBP13765 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms