Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBL4AP11441 ESRRAP2-201ENST00000418437 1549 ntBASIC20.19■□□□□ 0.82
UBL4AP11441 AC133637.1-201ENST00000624115 1537 ntBASIC20.19■□□□□ 0.82
UBL4AP11441 AL136116.3-201ENST00000402907 1138 ntBASIC20.19■□□□□ 0.82
UBL4AP11441 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.19■□□□□ 0.82
UBL4AP11441 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.19■□□□□ 0.82
UBL4AP11441 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL4AP11441 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL4AP11441 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBL4AP11441 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBL4AP11441 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
UBL4AP11441 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
UBL4AP11441 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 DUX4L19-201ENST00000557448 1267 ntBASIC20.18■□□□□ 0.82
UBL4AP11441 MIR3181-201ENST00000578512 73 ntBASIC20.18■□□□□ 0.82
UBL4AP11441 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
UBL4AP11441 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.18■□□□□ 0.82
UBL4AP11441 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL4AP11441 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL4AP11441 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBL4AP11441 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL4AP11441 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL4AP11441 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
UBL4AP11441 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.17■□□□□ 0.82
UBL4AP11441 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL4AP11441 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.17■□□□□ 0.82
UBL4AP11441 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.17■□□□□ 0.82
UBL4AP11441 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.17■□□□□ 0.82
UBL4AP11441 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.17■□□□□ 0.82
UBL4AP11441 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
UBL4AP11441 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.16■□□□□ 0.82
UBL4AP11441 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.16■□□□□ 0.82
UBL4AP11441 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.16■□□□□ 0.82
UBL4AP11441 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.16■□□□□ 0.82
UBL4AP11441 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
UBL4AP11441 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBL4AP11441 LINC01960-201ENST00000563759 1884 ntBASIC20.16■□□□□ 0.82
UBL4AP11441 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.16■□□□□ 0.82
UBL4AP11441 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBL4AP11441 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
UBL4AP11441 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBL4AP11441 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL4AP11441 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL4AP11441 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL4AP11441 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.15■□□□□ 0.82
UBL4AP11441 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBL4AP11441 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL4AP11441 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBL4AP11441 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBL4AP11441 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBL4AP11441 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBL4AP11441 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBL4AP11441 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL4AP11441 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL4AP11441 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
UBL4AP11441 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
UBL4AP11441 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
UBL4AP11441 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.14■□□□□ 0.81
UBL4AP11441 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL4AP11441 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL4AP11441 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UBL4AP11441 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL4AP11441 AC008406.3-201ENST00000620001 1374 ntBASIC20.13■□□□□ 0.81
UBL4AP11441 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
UBL4AP11441 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 SERBP1P1-201ENST00000396021 1160 ntBASIC20.13■□□□□ 0.81
UBL4AP11441 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
UBL4AP11441 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 AL138724.1-201ENST00000606771 1088 ntBASIC20.13■□□□□ 0.81
UBL4AP11441 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
UBL4AP11441 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBL4AP11441 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.12■□□□□ 0.81
UBL4AP11441 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL4AP11441 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.12■□□□□ 0.81
UBL4AP11441 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBL4AP11441 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL4AP11441 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.12■□□□□ 0.81
UBL4AP11441 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.12■□□□□ 0.81
UBL4AP11441 AC087742.1-201ENST00000575880 1738 ntBASIC20.12■□□□□ 0.81
UBL4AP11441 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL4AP11441 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms