Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.79■■■□□ 2.68
CHGAP10645 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.79■■■□□ 2.68
CHGAP10645 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHGAP10645 AC087239.1-201ENST00000622671 572 ntBASIC31.79■■■□□ 2.68
CHGAP10645 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHGAP10645 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHGAP10645 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.78■■■□□ 2.68
CHGAP10645 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 AL355802.2-201ENST00000402069 882 ntBASIC31.78■■■□□ 2.68
CHGAP10645 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.78■■■□□ 2.68
CHGAP10645 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.78■■■□□ 2.68
CHGAP10645 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
CHGAP10645 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHGAP10645 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC31.78■■■□□ 2.68
CHGAP10645 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.77■■■□□ 2.68
CHGAP10645 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.77■■■□□ 2.68
CHGAP10645 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.77■■■□□ 2.68
CHGAP10645 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHGAP10645 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHGAP10645 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHGAP10645 LINC01124-201ENST00000409786 2117 ntBASIC31.76■■■□□ 2.68
CHGAP10645 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHGAP10645 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.76■■■□□ 2.67
CHGAP10645 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CHGAP10645 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.76■■■□□ 2.67
CHGAP10645 AC011767.1-201ENST00000617410 1153 ntBASIC31.76■■■□□ 2.67
CHGAP10645 AL109923.1-201ENST00000618799 583 ntBASIC31.76■■■□□ 2.67
CHGAP10645 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CHGAP10645 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.76■■■□□ 2.67
CHGAP10645 AC020928.2-201ENST00000588717 2197 ntBASIC31.75■■■□□ 2.67
CHGAP10645 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.75■■■□□ 2.67
CHGAP10645 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CHGAP10645 ESRRAP2-201ENST00000418437 1549 ntBASIC31.75■■■□□ 2.67
CHGAP10645 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHGAP10645 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.75■■■□□ 2.67
CHGAP10645 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CHGAP10645 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.75■■■□□ 2.67
CHGAP10645 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.75■■■□□ 2.67
CHGAP10645 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.75■■■□□ 2.67
CHGAP10645 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.75■■■□□ 2.67
CHGAP10645 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CHGAP10645 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.75■■■□□ 2.67
CHGAP10645 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
CHGAP10645 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHGAP10645 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CHGAP10645 AC004812.2-201ENST00000611079 2094 ntBASIC31.74■■■□□ 2.67
CHGAP10645 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHGAP10645 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHGAP10645 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.74■■■□□ 2.67
CHGAP10645 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHGAP10645 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHGAP10645 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.74■■■□□ 2.67
CHGAP10645 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
CHGAP10645 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.73■■■□□ 2.67
CHGAP10645 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CHGAP10645 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.73■■■□□ 2.67
CHGAP10645 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC31.73■■■□□ 2.67
CHGAP10645 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
CHGAP10645 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHGAP10645 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CHGAP10645 AC079140.4-201ENST00000507448 529 ntBASIC31.73■■■□□ 2.67
CHGAP10645 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.73■■■□□ 2.67
CHGAP10645 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.72■■■□□ 2.67
CHGAP10645 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.72■■■□□ 2.67
CHGAP10645 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHGAP10645 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
CHGAP10645 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHGAP10645 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.71■■■□□ 2.67
CHGAP10645 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.71■■■□□ 2.67
CHGAP10645 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHGAP10645 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CHGAP10645 MIR663A-201ENST00000385250 93 ntBASIC31.7■■■□□ 2.67
CHGAP10645 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.7■■■□□ 2.67
CHGAP10645 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.7■■■□□ 2.67
CHGAP10645 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.7■■■□□ 2.67
CHGAP10645 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
CHGAP10645 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.7■■■□□ 2.66
CHGAP10645 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.69■■■□□ 2.66
CHGAP10645 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHGAP10645 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.69■■■□□ 2.66
CHGAP10645 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.69■■■□□ 2.66
CHGAP10645 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHGAP10645 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.69■■■□□ 2.66
CHGAP10645 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHGAP10645 H19-210ENST00000439725 1929 ntTSL 2 BASIC31.69■■■□□ 2.66
CHGAP10645 LINC00543-201ENST00000567234 1845 ntBASIC31.68■■■□□ 2.66
CHGAP10645 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.68■■■□□ 2.66
CHGAP10645 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms