Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 TPM1YNL079C 600 nt6.41□□□□□ -1.38
TY1A-PR2P0CX60 MSS51YLR203C 1311 nt6.41□□□□□ -1.38
TY1A-PR2P0CX60 PSY4YBL046W 1326 nt6.41□□□□□ -1.38
TY1A-PR2P0CX60 SAS10YDL153C 1833 nt6.41□□□□□ -1.38
TY1A-PR2P0CX60 FAR8YMR029C 1572 nt6.4□□□□□ -1.38
TY1A-PR2P0CX60 YDR396WYDR396W 501 nt6.4□□□□□ -1.38
TY1A-PR2P0CX60 HRA1HRA1 564 nt6.4□□□□□ -1.38
TY1A-PR2P0CX60 MRP17YKL003C 396 nt6.4□□□□□ -1.38
TY1A-PR2P0CX60 RPL17AYKL180W 555 nt6.4□□□□□ -1.38
TY1A-PR2P0CX60 YMR135W-AYMR135W-A 534 nt6.4□□□□□ -1.38
TY1A-PR2P0CX60 PPN1YDR452W 2025 nt6.4□□□□□ -1.39
TY1A-PR2P0CX60 DLD1YDL174C 1764 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 SIT1YEL065W 1887 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 SRD1YCR018C 666 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 DST1YGL043W 930 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 YGL260WYGL260W 231 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 PRP45YAL032C 1140 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 DCS1YLR270W 1053 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 RIO2YNL207W 1278 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 ASA1YPR085C 1332 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 NUP1YOR098C 3231 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 DUG1YFR044C 1446 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 YMR155WYMR155W 1644 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 SAT4YCR008W 1812 nt6.39□□□□□ -1.39
TY1A-PR2P0CX60 YCL076WYCL076W 744 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 CDC43YGL155W 1131 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 YHL002C-AYHL002C-A 489 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 CFD1YIL003W 882 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 YKL151CYKL151C 1014 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 ZRT2YLR130C 1269 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 YMR310CYMR310C 954 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 MDG1YNL173C 1101 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 YNL198CYNL198C 303 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 YNR014WYNR014W 639 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 CIN5YOR028C 888 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 RPA43YOR340C 981 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 MSL5YLR116W 1431 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 POL31YJR006W 1464 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 SST2YLR452C 2097 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 PRT1YOR361C 2292 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 ATG1YGL180W 2694 nt6.38□□□□□ -1.39
TY1A-PR2P0CX60 KNS1YLL019C 2214 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 AFR1YDR085C 1863 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 RAD28YDR030C 1521 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 UBC8YEL012W 657 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 YFR034W-AYFR034W-A 288 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 TIF11YMR260C 462 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 TPK2YPL203W 1143 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 YLL066CYLL066C 3618 nt6.37□□□□□ -1.39
TY1A-PR2P0CX60 XKS1YGR194C 1803 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 YDR387CYDR387C 1668 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 ADH7YCR105W 1086 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 FMN1YDR236C 657 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 RPL12AYEL054C 498 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 YER135CYER135C 393 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 HEM2YGL040C 1029 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 BUD13YGL174W 801 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 LAG1YHL003C 1236 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 YAL019W-AYAL019W-A 570 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 YKR032WYKR032W 315 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 YLR126CYLR126C 756 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 COQ5YML110C 924 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 PDC6YGR087C 1692 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 AVO1YOL078W 3531 nt6.36□□□□□ -1.39
TY1A-PR2P0CX60 AEP1YMR064W 1557 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 GSH1YJL101C 2037 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 GPD2YOL059W 1323 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 YGR121W-AYGR121W-A 216 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 YGR137WYGR137W 375 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 PDX1YGR193C 1233 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 CDC12YHR107C 1224 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 RPL2BYIL018W 765 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 YAR029WYAR029W 225 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 RNH203YLR154C 333 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 YMR320WYMR320W 306 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 HBN1YCL026C-B 582 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 ADF1YCL058W-A 342 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 GLN3YER040W 2193 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 EKI1YDR147W 1605 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 YIL067CYIL067C 2037 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 IFM1YOL023W 2031 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 VMA2YBR127C 1554 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 SDS24YBR214W 1584 nt6.35□□□□□ -1.39
TY1A-PR2P0CX60 CIR2YOR356W 1896 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 RSM7YJR113C 744 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 BLI1YKL061W 342 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 OCA2YNL056W 594 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 SWS2YNL081C 432 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 YNL089CYNL089C 477 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 MET22YOL064C 1074 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 MHF1YOL086W-A 273 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 HRP1YOL123W 1605 nt6.34□□□□□ -1.39
TY1A-PR2P0CX60 YKR078WYKR078W 1758 nt6.34□□□□□ -1.4
TY1A-PR2P0CX60 BDP1YNL039W 1785 nt6.34□□□□□ -1.4
TY1A-PR2P0CX60 EMP65YER140W 1671 nt6.33□□□□□ -1.4
TY1A-PR2P0CX60 YDL187CYDL187C 330 nt6.33□□□□□ -1.4
TY1A-PR2P0CX60 DPP1YDR284C 870 nt6.33□□□□□ -1.4
TY1A-PR2P0CX60 RGI1YER067W 486 nt6.33□□□□□ -1.4
TY1A-PR2P0CX60 YHR007C-AYHR007C-A 216 nt6.33□□□□□ -1.4
TY1A-PR2P0CX60 YKL147CYKL147C 618 nt6.33□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms