Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.96■■□□□ 1.11
SP9P0CG40 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP9P0CG40 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.96■■□□□ 1.11
SP9P0CG40 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SP9P0CG40 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SP9P0CG40 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SP9P0CG40 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SP9P0CG40 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SP9P0CG40 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.95■■□□□ 1.1
SP9P0CG40 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.95■■□□□ 1.1
SP9P0CG40 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SP9P0CG40 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SP9P0CG40 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP9P0CG40 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP9P0CG40 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP9P0CG40 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.94■■□□□ 1.1
SP9P0CG40 AP006294.2-201ENST00000641667 209 ntBASIC21.94■■□□□ 1.1
SP9P0CG40 MYCNOS-205ENST00000641950 531 ntBASIC21.94■■□□□ 1.1
SP9P0CG40 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SP9P0CG40 KRT87P-202ENST00000534226 1464 ntBASIC21.94■■□□□ 1.1
SP9P0CG40 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.94■■□□□ 1.1
SP9P0CG40 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SP9P0CG40 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP9P0CG40 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP9P0CG40 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SP9P0CG40 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP9P0CG40 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP9P0CG40 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.93■■□□□ 1.1
SP9P0CG40 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SP9P0CG40 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SP9P0CG40 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SP9P0CG40 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SP9P0CG40 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.93■■□□□ 1.1
SP9P0CG40 MIR4758-201ENST00000577688 71 ntBASIC21.93■■□□□ 1.1
SP9P0CG40 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.93■■□□□ 1.1
SP9P0CG40 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
SP9P0CG40 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP9P0CG40 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SP9P0CG40 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.92■■□□□ 1.1
SP9P0CG40 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.92■■□□□ 1.1
SP9P0CG40 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.92■■□□□ 1.1
SP9P0CG40 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.92■■□□□ 1.1
SP9P0CG40 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SP9P0CG40 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SP9P0CG40 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SP9P0CG40 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SP9P0CG40 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SP9P0CG40 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.91■■□□□ 1.1
SP9P0CG40 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SP9P0CG40 CNN2P6-201ENST00000439038 900 ntBASIC21.91■■□□□ 1.1
SP9P0CG40 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.91■■□□□ 1.1
SP9P0CG40 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.91■■□□□ 1.1
SP9P0CG40 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.91■■□□□ 1.1
SP9P0CG40 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.91■■□□□ 1.1
SP9P0CG40 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SP9P0CG40 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.9■■□□□ 1.1
SP9P0CG40 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.9■■□□□ 1.1
SP9P0CG40 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.9■■□□□ 1.1
SP9P0CG40 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SP9P0CG40 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SP9P0CG40 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SP9P0CG40 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.9■■□□□ 1.1
SP9P0CG40 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SP9P0CG40 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.9■■□□□ 1.1
SP9P0CG40 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.9■■□□□ 1.1
SP9P0CG40 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.89■■□□□ 1.1
SP9P0CG40 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SP9P0CG40 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SP9P0CG40 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SP9P0CG40 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SP9P0CG40 DUSP5P2-201ENST00000426873 1033 ntBASIC21.89■■□□□ 1.09
SP9P0CG40 AC098590.1-201ENST00000468126 897 ntBASIC21.89■■□□□ 1.09
SP9P0CG40 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SP9P0CG40 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SP9P0CG40 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.88■■□□□ 1.09
SP9P0CG40 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SP9P0CG40 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SP9P0CG40 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.88■■□□□ 1.09
SP9P0CG40 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.88■■□□□ 1.09
SP9P0CG40 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SP9P0CG40 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SP9P0CG40 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.87■■□□□ 1.09
SP9P0CG40 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 SLC7A5P1-201ENST00000568957 537 ntBASIC21.87■■□□□ 1.09
SP9P0CG40 AP001160.3-201ENST00000601484 763 ntBASIC21.87■■□□□ 1.09
SP9P0CG40 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SP9P0CG40 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SP9P0CG40 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms