Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 GCN5YGR252W 1320 nt4.67□□□□□ -1.66
TY2B-LR1P0C2J3 NUP85YJR042W 2235 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 PRP9YDL030W 1593 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 GUS1YGL245W 2127 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 NIS1YNL078W 1224 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 YOL107WYOL107W 1029 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 PNG1YPL096W 1092 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 YIL169CYIL169C 2988 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 TAF1YGR274C 3201 nt4.66□□□□□ -1.66
TY2B-LR1P0C2J3 ZDS1YMR273C 2748 nt4.65□□□□□ -1.66
TY2B-LR1P0C2J3 PAU23YLR037C 375 nt4.65□□□□□ -1.66
TY2B-LR1P0C2J3 YPL276WYPL276W 438 nt4.65□□□□□ -1.66
TY2B-LR1P0C2J3 DIB1YPR082C 432 nt4.65□□□□□ -1.66
TY2B-LR1P0C2J3 HEH2YDR458C 1992 nt4.65□□□□□ -1.66
TY2B-LR1P0C2J3 RAD26YJR035W 3258 nt4.65□□□□□ -1.66
TY2B-LR1P0C2J3 NNK1YKL171W 2787 nt4.65□□□□□ -1.67
TY2B-LR1P0C2J3 PUS7YOR243C 2031 nt4.64□□□□□ -1.67
TY2B-LR1P0C2J3 YPK9YOR291W 4419 nt4.64□□□□□ -1.67
TY2B-LR1P0C2J3 YHR069C-AYHR069C-A 363 nt4.64□□□□□ -1.67
TY2B-LR1P0C2J3 DAN4YJR151C 3486 nt4.64□□□□□ -1.67
TY2B-LR1P0C2J3 YPS6YIR039C 1614 nt4.64□□□□□ -1.67
TY2B-LR1P0C2J3 DDC1YPL194W 1839 nt4.64□□□□□ -1.67
TY2B-LR1P0C2J3 YAL031W-AYAL031W-A 309 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 MSN1YOL116W 1149 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 NAM2YLR382C 2685 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 VTC4YJL012C 2166 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 STV1YMR054W 2673 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 YER134CYER134C 537 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 PEX18YHR160C 852 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 YML037CYML037C 1023 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 GRE1YPL223C 507 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 YPR136CYPR136C 513 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 ESF1YDR365C 1887 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 NOP2YNL061W 1857 nt4.63□□□□□ -1.67
TY2B-LR1P0C2J3 ARO9YHR137W 1542 nt4.62□□□□□ -1.67
TY2B-LR1P0C2J3 CMR1YDL156W 1569 nt4.62□□□□□ -1.67
TY2B-LR1P0C2J3 RPS21AYKR057W 264 nt4.61□□□□□ -1.67
TY2B-LR1P0C2J3 YDR526CYDR526C 471 nt4.6□□□□□ -1.67
TY2B-LR1P0C2J3 PRX1YBL064C 786 nt4.6□□□□□ -1.67
TY2B-LR1P0C2J3 CDC14YFR028C 1656 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 XRN1YGL173C 4587 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 SPT23YKL020C 3249 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 CHA4YLR098C 1947 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 PDR3YBL005W 2931 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 YKL107WYKL107W 930 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 YLR297WYLR297W 390 nt4.59□□□□□ -1.67
TY2B-LR1P0C2J3 YOR022CYOR022C 2148 nt4.59□□□□□ -1.68
TY2B-LR1P0C2J3 YIL175WYIL175W 318 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 YJL222W-BYJL222W-B 138 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 SIR1YKR101W 1965 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 BLM10YFL007W 6432 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 ILS1YBL076C 3219 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 YLR001CYLR001C 2589 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 ATG2YNL242W 4779 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 YDR396WYDR396W 501 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 ERP6YGL002W 651 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 YGR016WYGR016W 573 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 CBP3YPL215W 1008 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 PEX32YBR168W 1242 nt4.58□□□□□ -1.68
TY2B-LR1P0C2J3 CCW14YLR390W-A 717 nt4.57□□□□□ -1.68
TY2B-LR1P0C2J3 snR43snR43 209 nt4.57□□□□□ -1.68
TY2B-LR1P0C2J3 RGC1YPR115W 3252 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 SPT6YGR116W 4356 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 TOM7YNL070W 183 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 TUM1YOR251C 915 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 VAC7YNL054W 3498 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 YPL109CYPL109C 1974 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 MDM34YGL219C 1380 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 GPI18YBR004C 1302 nt4.56□□□□□ -1.68
TY2B-LR1P0C2J3 GUP1YGL084C 1683 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 RPS11AYDR025W 471 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 VEL1YGL258W 621 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 RNR2YJL026W 1200 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 SRP40YKR092C 1221 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 FKH1YIL131C 1455 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 WTM2YOR229W 1404 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 LCL2YLR104W 396 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 PRS5YOL061W 1491 nt4.55□□□□□ -1.68
TY2B-LR1P0C2J3 YPL150WYPL150W 2706 nt4.54□□□□□ -1.68
TY2B-LR1P0C2J3 ABD1YBR236C 1311 nt4.54□□□□□ -1.68
TY2B-LR1P0C2J3 MMR1YLR190W 1476 nt4.54□□□□□ -1.68
TY2B-LR1P0C2J3 TMA108YIL137C 2841 nt4.54□□□□□ -1.68
TY2B-LR1P0C2J3 YDL180WYDL180W 1644 nt4.54□□□□□ -1.68
TY2B-LR1P0C2J3 CSM3YMR048W 954 nt4.53□□□□□ -1.68
TY2B-LR1P0C2J3 TFB2YPL122C 1542 nt4.53□□□□□ -1.68
TY2B-LR1P0C2J3 PAM18YLR008C 507 nt4.53□□□□□ -1.69
TY2B-LR1P0C2J3 ARP4YJL081C 1470 nt4.52□□□□□ -1.69
TY2B-LR1P0C2J3 SMC6YLR383W 3345 nt4.52□□□□□ -1.69
TY2B-LR1P0C2J3 RSM24YDR175C 960 nt4.52□□□□□ -1.69
TY2B-LR1P0C2J3 AFT1YGL071W 2073 nt4.52□□□□□ -1.69
TY2B-LR1P0C2J3 BCP1YDR361C 852 nt4.51□□□□□ -1.69
TY2B-LR1P0C2J3 YHR052W-AYHR052W-A 195 nt4.51□□□□□ -1.69
TY2B-LR1P0C2J3 YHR054W-AYHR054W-A 195 nt4.51□□□□□ -1.69
TY2B-LR1P0C2J3 AIM25YJR100C 984 nt4.51□□□□□ -1.69
TY2B-LR1P0C2J3 IDP2YLR174W 1239 nt4.51□□□□□ -1.69
TY2B-LR1P0C2J3 DCS1YLR270W 1053 nt4.51□□□□□ -1.69
TY2B-LR1P0C2J3 CWH41YGL027C 2502 nt4.5□□□□□ -1.69
TY2B-LR1P0C2J3 SHH3YMR118C 591 nt4.5□□□□□ -1.69
TY2B-LR1P0C2J3 TRM44YPL030W 1704 nt4.5□□□□□ -1.69
TY2B-LR1P0C2J3 AYT1YLL063C 1425 nt4.5□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms