Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 AL137784.2-201ENST00000607332 1000 ntBASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40ALP0C0E4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 AC004687.1-201ENST00000579003 1625 ntBASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 NTF6G-201ENST00000591094 616 ntBASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB40ALP0C0E4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 AC087239.1-201ENST00000622671 572 ntBASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 AL353803.4-201ENST00000565882 1934 ntBASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40ALP0C0E4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40ALP0C0E4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.64■□□□□ 0.9
RAB40ALP0C0E4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB40ALP0C0E4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAB40ALP0C0E4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40ALP0C0E4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 AC010141.3-201ENST00000456659 717 ntBASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 RARRES2P11-201ENST00000635158 484 ntBASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB40ALP0C0E4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms