Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 BOI2YER114C 3123 nt3.95□□□□□ -1.78
RAD3P06839 RDH54YBR073W 2877 nt3.95□□□□□ -1.78
RAD3P06839 ALR2YFL050C 2577 nt3.95□□□□□ -1.78
RAD3P06839 RTS1YOR014W 2274 nt3.95□□□□□ -1.78
RAD3P06839 YGL188CYGL188C 174 nt3.94□□□□□ -1.78
RAD3P06839 DSD1YGL196W 1287 nt3.94□□□□□ -1.78
RAD3P06839 REC104YHR157W 549 nt3.94□□□□□ -1.78
RAD3P06839 SGN1YIR001C 753 nt3.94□□□□□ -1.78
RAD3P06839 NAM2YLR382C 2685 nt3.94□□□□□ -1.78
RAD3P06839 SWC7YLR385C 399 nt3.93□□□□□ -1.78
RAD3P06839 FAA1YOR317W 2103 nt3.92□□□□□ -1.78
RAD3P06839 ARX1YDR101C 1782 nt3.92□□□□□ -1.78
RAD3P06839 APP1YNL094W 1764 nt3.92□□□□□ -1.78
RAD3P06839 HOM2YDR158W 1098 nt3.92□□□□□ -1.78
RAD3P06839 YDR161WYDR161W 1164 nt3.92□□□□□ -1.78
RAD3P06839 SNO1YMR095C 675 nt3.92□□□□□ -1.78
RAD3P06839 MRPL24YMR193W 777 nt3.92□□□□□ -1.78
RAD3P06839 IBD2YNL164C 1056 nt3.92□□□□□ -1.78
RAD3P06839 TDA1YMR291W 1761 nt3.91□□□□□ -1.78
RAD3P06839 IMG2YCR071C 441 nt3.91□□□□□ -1.78
RAD3P06839 MAG1YER142C 891 nt3.91□□□□□ -1.78
RAD3P06839 YGL074CYGL074C 327 nt3.91□□□□□ -1.78
RAD3P06839 SPO12YHR152W 522 nt3.91□□□□□ -1.78
RAD3P06839 DPH1YIL103W 1278 nt3.91□□□□□ -1.78
RAD3P06839 YLL017WYLL017W 312 nt3.91□□□□□ -1.78
RAD3P06839 IOC4YMR044W 1428 nt3.91□□□□□ -1.78
RAD3P06839 YBL036CYBL036C 774 nt3.91□□□□□ -1.78
RAD3P06839 TSR1YDL060W 2367 nt3.91□□□□□ -1.78
RAD3P06839 NGL3YML118W 1518 nt3.9□□□□□ -1.78
RAD3P06839 FAT1YBR041W 2010 nt3.9□□□□□ -1.78
RAD3P06839 SWP82YFL049W 1872 nt3.9□□□□□ -1.78
RAD3P06839 TAF6YGL112C 1551 nt3.9□□□□□ -1.78
RAD3P06839 MRS2YOR334W 1413 nt3.9□□□□□ -1.78
RAD3P06839 MCD4YKL165C 2760 nt3.9□□□□□ -1.78
RAD3P06839 HPR1YDR138W 2259 nt3.9□□□□□ -1.79
RAD3P06839 MRPL11YDL202W 750 nt3.9□□□□□ -1.79
RAD3P06839 SPI1YER150W 447 nt3.9□□□□□ -1.79
RAD3P06839 YGL132WYGL132W 336 nt3.9□□□□□ -1.79
RAD3P06839 TIM21YGR033C 720 nt3.9□□□□□ -1.79
RAD3P06839 YJR037WYJR037W 384 nt3.9□□□□□ -1.79
RAD3P06839 MMM1YLL006W 1281 nt3.9□□□□□ -1.79
RAD3P06839 CWC25YNL245C 540 nt3.9□□□□□ -1.79
RAD3P06839 BSD2YBR290W 966 nt3.9□□□□□ -1.79
RAD3P06839 RAD54YGL163C 2697 nt3.9□□□□□ -1.79
RAD3P06839 MSN4YKL062W 1893 nt3.9□□□□□ -1.79
RAD3P06839 ALG11YNL048W 1647 nt3.89□□□□□ -1.79
RAD3P06839 FAD1YDL045C 921 nt3.89□□□□□ -1.79
RAD3P06839 SLX8YER116C 825 nt3.89□□□□□ -1.79
RAD3P06839 TOM20YGR082W 552 nt3.89□□□□□ -1.79
RAD3P06839 PHO87YCR037C 2772 nt3.89□□□□□ -1.79
RAD3P06839 MIG3YER028C 1185 nt3.88□□□□□ -1.79
RAD3P06839 OTU1YFL044C 906 nt3.88□□□□□ -1.79
RAD3P06839 HIS5YIL116W 1158 nt3.88□□□□□ -1.79
RAD3P06839 MED7YOL135C 669 nt3.88□□□□□ -1.79
RAD3P06839 YAR1YPL239W 603 nt3.88□□□□□ -1.79
RAD3P06839 BAR1YIL015W 1764 nt3.88□□□□□ -1.79
RAD3P06839 PRM2YIL037C 1971 nt3.87□□□□□ -1.79
RAD3P06839 TCM62YBR044C 1719 nt3.87□□□□□ -1.79
RAD3P06839 BMH1YER177W 804 nt3.87□□□□□ -1.79
RAD3P06839 ECO1YFR027W 846 nt3.87□□□□□ -1.79
RAD3P06839 BNA1YJR025C 534 nt3.87□□□□□ -1.79
RAD3P06839 ANB1YJR047C 474 nt3.87□□□□□ -1.79
RAD3P06839 PIR3YKL163W 978 nt3.87□□□□□ -1.79
RAD3P06839 ATG8YBL078C 354 nt3.87□□□□□ -1.79
RAD3P06839 FDH2YPL275W 711 nt3.87□□□□□ -1.79
RAD3P06839 ASI1YMR119W 1875 nt3.87□□□□□ -1.79
RAD3P06839 SIR1YKR101W 1965 nt3.87□□□□□ -1.79
RAD3P06839 RNA14YMR061W 2034 nt3.87□□□□□ -1.79
RAD3P06839 MUM3YOR298W 1440 nt3.87□□□□□ -1.79
RAD3P06839 TRS120YDR407C 3870 nt3.86□□□□□ -1.79
RAD3P06839 BSC1YDL037C 987 nt3.86□□□□□ -1.79
RAD3P06839 tV(CAC)DtV(CAC)D 73 nt3.86□□□□□ -1.79
RAD3P06839 tV(CAC)HtV(CAC)H 73 nt3.86□□□□□ -1.79
RAD3P06839 RNA1YMR235C 1224 nt3.86□□□□□ -1.79
RAD3P06839 DAN4YJR151C 3486 nt3.86□□□□□ -1.79
RAD3P06839 FLO9YAL063C 3969 nt3.86□□□□□ -1.79
RAD3P06839 GPB1YOR371C 2694 nt3.86□□□□□ -1.79
RAD3P06839 YRM1YOR172W 2361 nt3.85□□□□□ -1.79
RAD3P06839 SMC3YJL074C 3693 nt3.85□□□□□ -1.79
RAD3P06839 TAF8YML114C 1533 nt3.85□□□□□ -1.79
RAD3P06839 SEG1YMR086W 2883 nt3.85□□□□□ -1.79
RAD3P06839 FAR8YMR029C 1572 nt3.85□□□□□ -1.79
RAD3P06839 MIH1YMR036C 1665 nt3.85□□□□□ -1.79
RAD3P06839 UPS2YLR168C 693 nt3.85□□□□□ -1.79
RAD3P06839 HMX1YLR205C 954 nt3.85□□□□□ -1.79
RAD3P06839 CMR3YPR013C 954 nt3.85□□□□□ -1.79
RAD3P06839 RTT109YLL002W 1311 nt3.85□□□□□ -1.79
RAD3P06839 CIT1YNR001C 1440 nt3.85□□□□□ -1.79
RAD3P06839 RKM3YBR030W 1659 nt3.84□□□□□ -1.79
RAD3P06839 BYE1YKL005C 1785 nt3.84□□□□□ -1.79
RAD3P06839 USA1YML029W 2517 nt3.84□□□□□ -1.79
RAD3P06839 ALE1YOR175C 1860 nt3.84□□□□□ -1.79
RAD3P06839 STU1YBL034C 4542 nt3.84□□□□□ -1.79
RAD3P06839 YDR230WYDR230W 348 nt3.84□□□□□ -1.79
RAD3P06839 MBR1YKL093W 1020 nt3.84□□□□□ -1.79
RAD3P06839 YKR047WYKR047W 306 nt3.84□□□□□ -1.79
RAD3P06839 YOL079WYOL079W 399 nt3.84□□□□□ -1.79
RAD3P06839 REB1YBR049C 2433 nt3.84□□□□□ -1.8
RAD3P06839 GLC3YEL011W 2115 nt3.83□□□□□ -1.8
RAD3P06839 YBR225WYBR225W 2703 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms