Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCCBP05166 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.74■■□□□ 1.07
PCCBP05166 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCCBP05166 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.74■■□□□ 1.07
PCCBP05166 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.74■■□□□ 1.07
PCCBP05166 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.74■■□□□ 1.07
PCCBP05166 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.74■■□□□ 1.07
PCCBP05166 AC010141.3-201ENST00000456659 717 ntBASIC21.74■■□□□ 1.07
PCCBP05166 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.74■■□□□ 1.07
PCCBP05166 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCCBP05166 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCCBP05166 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.74■■□□□ 1.07
PCCBP05166 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCCBP05166 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCCBP05166 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.73■■□□□ 1.07
PCCBP05166 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.73■■□□□ 1.07
PCCBP05166 AC027612.3-201ENST00000413684 1047 ntBASIC21.73■■□□□ 1.07
PCCBP05166 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCCBP05166 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCCBP05166 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCCBP05166 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCCBP05166 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCCBP05166 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCCBP05166 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.72■■□□□ 1.07
PCCBP05166 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.72■■□□□ 1.07
PCCBP05166 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.72■■□□□ 1.07
PCCBP05166 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCCBP05166 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCCBP05166 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.72■■□□□ 1.07
PCCBP05166 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCCBP05166 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCCBP05166 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCCBP05166 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.72■■□□□ 1.07
PCCBP05166 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.71■■□□□ 1.07
PCCBP05166 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.71■■□□□ 1.07
PCCBP05166 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.71■■□□□ 1.07
PCCBP05166 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCCBP05166 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.71■■□□□ 1.07
PCCBP05166 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.71■■□□□ 1.07
PCCBP05166 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PCCBP05166 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.71■■□□□ 1.07
PCCBP05166 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCCBP05166 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCCBP05166 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCCBP05166 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.7■■□□□ 1.06
PCCBP05166 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCCBP05166 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.7■■□□□ 1.06
PCCBP05166 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCCBP05166 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.7■■□□□ 1.06
PCCBP05166 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.7■■□□□ 1.06
PCCBP05166 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.7■■□□□ 1.06
PCCBP05166 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.7■■□□□ 1.06
PCCBP05166 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.69■■□□□ 1.06
PCCBP05166 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCCBP05166 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCCBP05166 AL162430.1-201ENST00000480705 870 ntBASIC21.69■■□□□ 1.06
PCCBP05166 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.69■■□□□ 1.06
PCCBP05166 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.69■■□□□ 1.06
PCCBP05166 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCCBP05166 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCCBP05166 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCCBP05166 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCCBP05166 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
PCCBP05166 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.69■■□□□ 1.06
PCCBP05166 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCCBP05166 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.68■■□□□ 1.06
PCCBP05166 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
PCCBP05166 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCCBP05166 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.68■■□□□ 1.06
PCCBP05166 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCCBP05166 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCCBP05166 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCCBP05166 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.68■■□□□ 1.06
PCCBP05166 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.67■■□□□ 1.06
PCCBP05166 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCCBP05166 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.67■■□□□ 1.06
PCCBP05166 LINC01960-201ENST00000563759 1884 ntBASIC21.67■■□□□ 1.06
PCCBP05166 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCCBP05166 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.67■■□□□ 1.06
PCCBP05166 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCCBP05166 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCCBP05166 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCCBP05166 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCCBP05166 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms