Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.34■□□□□ 0.37
IFNA1P01562 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.34■□□□□ 0.37
IFNA1P01562 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNA1P01562 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNA1P01562 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNA1P01562 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNA1P01562 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNA1P01562 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.33■□□□□ 0.37
IFNA1P01562 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.33■□□□□ 0.37
IFNA1P01562 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNA1P01562 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IFNA1P01562 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.33■□□□□ 0.36
IFNA1P01562 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.33■□□□□ 0.36
IFNA1P01562 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 AC005229.4-201ENST00000610085 2198 ntBASIC17.33■□□□□ 0.36
IFNA1P01562 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 AC010542.4-201ENST00000563151 1910 ntBASIC17.33■□□□□ 0.36
IFNA1P01562 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNA1P01562 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 SMPD5-203ENST00000639008 1464 ntBASIC17.32■□□□□ 0.36
IFNA1P01562 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.32■□□□□ 0.36
IFNA1P01562 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.32■□□□□ 0.36
IFNA1P01562 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNA1P01562 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNA1P01562 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNA1P01562 AL157400.5-201ENST00000507624 621 ntBASIC17.31■□□□□ 0.36
IFNA1P01562 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNA1P01562 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.31■□□□□ 0.36
IFNA1P01562 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNA1P01562 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
IFNA1P01562 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 LINC01521-201ENST00000504184 1943 ntBASIC17.3■□□□□ 0.36
IFNA1P01562 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFNA1P01562 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.3■□□□□ 0.36
IFNA1P01562 DUX4L11-201ENST00000611504 1267 ntBASIC17.3■□□□□ 0.36
IFNA1P01562 DUX4L12-201ENST00000614593 1267 ntBASIC17.3■□□□□ 0.36
IFNA1P01562 DUX4L14-201ENST00000621227 1267 ntBASIC17.3■□□□□ 0.36
IFNA1P01562 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFNA1P01562 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFNA1P01562 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IFNA1P01562 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IFNA1P01562 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFNA1P01562 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFNA1P01562 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IFNA1P01562 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.29■□□□□ 0.36
IFNA1P01562 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
IFNA1P01562 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.29■□□□□ 0.36
IFNA1P01562 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.29■□□□□ 0.36
IFNA1P01562 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IFNA1P01562 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
IFNA1P01562 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFNA1P01562 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
IFNA1P01562 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.28■□□□□ 0.36
IFNA1P01562 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA1P01562 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA1P01562 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
IFNA1P01562 AIRN-201ENST00000601203 4374 ntBASIC17.28■□□□□ 0.36
IFNA1P01562 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA1P01562 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA1P01562 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA1P01562 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
IFNA1P01562 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
IFNA1P01562 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms