Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PDGFBP01127 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PDGFBP01127 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFBP01127 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PDGFBP01127 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFBP01127 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFBP01127 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PDGFBP01127 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.34■■□□□ 1.17
PDGFBP01127 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFBP01127 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFBP01127 AL596275.1-201ENST00000423464 877 ntBASIC22.34■■□□□ 1.17
PDGFBP01127 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFBP01127 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PDGFBP01127 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
PDGFBP01127 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PDGFBP01127 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
PDGFBP01127 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFBP01127 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PDGFBP01127 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFBP01127 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.33■■□□□ 1.17
PDGFBP01127 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFBP01127 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.33■■□□□ 1.17
PDGFBP01127 SLC7A5P1-201ENST00000568957 537 ntBASIC22.33■■□□□ 1.17
PDGFBP01127 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.33■■□□□ 1.17
PDGFBP01127 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDGFBP01127 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDGFBP01127 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
PDGFBP01127 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PDGFBP01127 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PDGFBP01127 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDGFBP01127 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.32■■□□□ 1.16
PDGFBP01127 DUSP5P2-201ENST00000426873 1033 ntBASIC22.32■■□□□ 1.16
PDGFBP01127 CNN2P6-201ENST00000439038 900 ntBASIC22.32■■□□□ 1.16
PDGFBP01127 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.32■■□□□ 1.16
PDGFBP01127 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDGFBP01127 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDGFBP01127 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.32■■□□□ 1.16
PDGFBP01127 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PDGFBP01127 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.31■■□□□ 1.16
PDGFBP01127 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFBP01127 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.31■■□□□ 1.16
PDGFBP01127 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFBP01127 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.31■■□□□ 1.16
PDGFBP01127 MYCNOS-205ENST00000641950 531 ntBASIC22.31■■□□□ 1.16
PDGFBP01127 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PDGFBP01127 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PDGFBP01127 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PDGFBP01127 AC135731.1-201ENST00000569415 2548 ntBASIC22.3■■□□□ 1.16
PDGFBP01127 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.3■■□□□ 1.16
PDGFBP01127 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.3■■□□□ 1.16
PDGFBP01127 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.3■■□□□ 1.16
PDGFBP01127 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.3■■□□□ 1.16
PDGFBP01127 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.3■■□□□ 1.16
PDGFBP01127 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 AC133552.2-202ENST00000575694 574 ntBASIC22.3■■□□□ 1.16
PDGFBP01127 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.3■■□□□ 1.16
PDGFBP01127 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFBP01127 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.3■■□□□ 1.16
PDGFBP01127 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PDGFBP01127 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.3■■□□□ 1.16
PDGFBP01127 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PDGFBP01127 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDGFBP01127 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.29■■□□□ 1.16
PDGFBP01127 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PDGFBP01127 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDGFBP01127 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDGFBP01127 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDGFBP01127 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.29■■□□□ 1.16
PDGFBP01127 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.29■■□□□ 1.16
PDGFBP01127 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.29■■□□□ 1.16
PDGFBP01127 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.29■■□□□ 1.16
PDGFBP01127 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDGFBP01127 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFBP01127 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFBP01127 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PDGFBP01127 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFBP01127 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.28■■□□□ 1.16
PDGFBP01127 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PDGFBP01127 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.28■■□□□ 1.16
PDGFBP01127 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.28■■□□□ 1.16
PDGFBP01127 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.28■■□□□ 1.16
PDGFBP01127 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFBP01127 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFBP01127 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFBP01127 KRT87P-202ENST00000534226 1464 ntBASIC22.28■■□□□ 1.16
PDGFBP01127 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PDGFBP01127 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDGFBP01127 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDGFBP01127 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDGFBP01127 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDGFBP01127 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDGFBP01127 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.27■■□□□ 1.16
PDGFBP01127 GCSHP5-201ENST00000443090 522 ntBASIC22.27■■□□□ 1.16
PDGFBP01127 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms